Acetobacter pasteurianus IFO 3283-01-42C: APA42C_19490
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Entry
APA42C_19490 CDS
T01818
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
apw
Acetobacter pasteurianus IFO 3283-01-42C
Pathway
apw03030
DNA replication
apw03430
Mismatch repair
apw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
APA42C_19490
03430 Mismatch repair
APA42C_19490
03440 Homologous recombination
APA42C_19490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apw03032
]
APA42C_19490
03400 DNA repair and recombination proteins [BR:
apw03400
]
APA42C_19490
Enzymes [BR:
apw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
APA42C_19490
DNA replication proteins [BR:
apw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
APA42C_19490
DNA repair and recombination proteins [BR:
apw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
APA42C_19490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
T2SSK
Rrn6_HB
Motif
Other DBs
NCBI-ProteinID:
BAI18294
LinkDB
All DBs
Position
complement(2031525..2034944)
Genome browser
AA seq
1139 aa
AA seq
DB search
MSYADFIHLRVHSAYSLSQGAIRVPDIAGLAKEMYMPAVGIADSGNLFGALEFSQYCTKS
GIQPIIGSQIGLPARNDKPGAPAEPVVLLAQNEAGLANLQFLSSAGFQNSDPADPFVSLD
LLCEKAEGLLLLTGGSRGPLFQMLAEGQTEDAEKWLARVHEAFGDRLIVELHRHGLAIEK
AVEPGVLTLADRFGLPLVATNECFFPTPEMYEAQDALLCIAQGRTMAEKDRFRVTPEHWF
KPPEMMRALFADLPDACDNTLEIARRCAIKVETRKPLLPVCPKVREGATEDETLRAMAWE
GLERRMSGMKLDAETIEKYKERLRFELDIISKMGFPGYFMIVADFIQWAKAHGIPVGPGR
GSGAGSLAAWALTITDIDPIPFNLLFERFLNPERVSMPDFDIDFCQDRRDEVIAYVRREY
GADRVAQIITFGKLQARAAVRDVGRVLGLPYGMVNRVAELIPNNPAKPVTLKEAIAGEPK
LQEMRDNDEALRRLLEIAQQLEGLFRHASTHAAGVVIGDRPLVQLVPLYRDPKSDTLVTQ
YNMKFVEQAGLVKFDFLGLTTLTILKRGVDFIRRMGKDVDLSHIPLDDPKTYEMLGRGDT
AGVFQFEGAGMRDVLKQMRPTRIEDLIAAVALYRPGPMANIPDYCRRKHGEAWEPPHEEI
RDILEETYGIMVYQEQVMQIAQKMAGYSLGGADLLRRAMGKKIRSEMDHQREIFTEGATK
RGIDRDKAVEVFDLMAKFADYGFNKSHAAAYAFVSYQTAWMKANHPVAFLAACMSLARER
TEKLAALRQEAERMHIAVLPPNINKSEADFSVEEQPDGTYAIRYALAAIKKVGYGAMESL
VEARGEKPFKNLADFAIRIDPKHINRMQLENLAKAGAFECIDKNRARVFRSADVILRRAH
SQAQEAASGQIGLFGGPGEVEPLRLVEGHDWPEFERLAMEAEAIGFHMTAHPLDAYGSVL
RRLGVTRTSQLLTAAELGGGRVKIAGCVVDKKERPTRTGNKMAWVRLSDASGGCEVTVFS
EVLTRVRDILVAGTAILVTADLKLEGEALRLTATDIVDLEAAAAQGQSEMRVWLEKPDAL
PDLQAILEPQKGGAGRIVLLPGVADSCDVEVRLRGRYKVTPVLGQRLRTLSGVSRVEQV
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacgctgattttatccaccttcgtgttcactctgcctattcgcttagccagggg
gccattcgtgtgcccgatattgcggggctggcgaaggaaatgtatatgcctgctgtgggt
attgcagattcaggcaatctgttcggagcgttggaattttctcagtattgtacaaaaagc
ggtattcagcccattattggcagccagattggcttgcctgcgcggaatgacaagcccggt
gctccagccgaaccggtcgtgcttctggcgcagaatgaagcaggcttggccaatcttcag
tttctttcttccgccgggtttcagaactcagatccagcagatccttttgtctccctagac
ctgctgtgtgaaaaagcagaggggttgctgctgctgaccggtggctcacgtggcccactt
ttccagatgctggccgaagggcaaacggaagatgccgaaaaatggctggcccgtgtgcat
gaggcatttggtgacaggctgattgtagaactgcaccgtcatggtctggctattgaaaaa
gctgtggaaccgggtgtgctgacattggctgaccggtttggtctgcctttggtggccacc
aatgaatgcttttttcctacgccagaaatgtacgaagcgcaggatgccctgttgtgcatt
gcccaagggcgcaccatggcagaaaaagatcgctttcgtgttacgccggaacattggttc
aagccgccggaaatgatgcgcgcactttttgcggatctgccagatgcgtgtgacaacacg
ctggaaattgcgcgccgctgcgccattaaggtggaaacccgcaaaccacttctgcctgtc
tgccccaaggtaagagaaggcgcgacagaagatgaaaccctgcgcgctatggcgtgggaa
gggttggaacgccgcatgtccggcatgaagctggatgcggaaactatagaaaaatacaag
gaacgtttgcgtttcgagctggatatcatctccaagatggggttccccggttacttcatg
atcgtggcggactttatccaatgggccaaggcgcatggtattccggttgggccgggccgt
ggttctggtgcggggtccttggccgcatgggcgcttaccatcacagatattgaccccatt
ccgttcaatctgctgttcgaacgttttctaaacccagaacgcgtttccatgcctgacttt
gatatcgatttctgtcaggacaggcgagacgaagtgattgcctatgtgcggcgtgaatat
ggggcagatcgcgttgcgcagattattaccttcggtaagctgcaagcacgcgctgctgtg
cgcgatgttgggcgtgtgttggggttgccatacggtatggttaaccgcgtggcagagctt
attcccaataacccagccaagccggttaccctgaaggaagctatcgcaggcgagcctaaa
ctgcaggaaatgcgtgataatgatgaggccctgcgcaggttgctggaaattgcccagcag
ctggaagggcttttccgtcatgccagtacgcatgcggcgggggtggttattggggatagg
ccgcttgtgcagcttgtgccgctgtaccgagaccccaaaagtgacacgctggttacccag
tataacatgaagtttgttgagcaagcgggcctcgtcaagttcgactttcttggtttaaca
acacttaccatcctgaaacgcggtgtcgatttcatccgccgaatgggcaaggatgtagac
ctcagccacattccgctggatgaccccaaaacgtatgaaatgctggggcggggtgatacc
gctggcgtgttccagtttgaaggcgcgggtatgcgcgatgttcttaaacagatgcgccca
acccgaatagaagatttgattgcagctgtggcgctgtatcgccccggcccaatggccaac
attcccgattactgccgtagaaaacacggtgaggcatgggaacccccgcacgaggaaatt
cgcgatattcttgaagagacctatggcatcatggtctatcaggaacaggttatgcagatt
gcccagaaaatggctggttatagcctaggtggcgcagatttgttgcgccgagccatgggt
aaaaagatccgttcggaaatggatcatcagcgtgaaatctttacagaaggcgcaaccaaa
cgcgggattgaccgtgataaggccgttgaggtgtttgaccttatggctaagtttgcagac
tatggttttaacaaatcccatgctgctgcttatgcttttgtgtcttaccaaacagcatgg
atgaaggctaaccatccggtggcctttctggcagcctgtatgtctctggcacgggagcgc
acggaaaaacttgccgctttgcggcaggaagcagagcgcatgcacattgctgttctgccg
ccgaatattaataaatcagaagctgatttctcggtcgaggaacagcctgatggcacatat
gcaatccgttatgcgctggctgccattaaaaaggttggctatggcgcaatggaatctctg
gtagaagcaaggggagaaaaaccctttaaaaatttggcagattttgcaatccgtattgac
ccgaagcacatcaaccggatgcagttggaaaacctggcaaaagccggtgcgtttgaatgt
attgataaaaaccgggcacgtgttttcaggtctgcagatgttatcttgcggcgtgcgcat
agccaagcgcaggaggctgcttctggccagatcgggttgtttggcgggccgggtgaagtt
gaacctttgcggctggtggaaggacatgattggccagaatttgaacgtctggcgatggaa
gccgaagctattggcttccatatgacagctcacccgctggatgcgtatggttctgtgctg
cggcgtctgggtgttacccgcacatcgcagttgctgacagcggcagaactgggtggtggc
cgtgttaaaattgctggctgtgtggtggataaaaaggaacgtcccacacgcacaggcaat
aaaatggcatgggtacgcctgtctgatgcttctggcggctgcgaagtaactgttttttcg
gaagtgctaacacgtgtgcgcgatattctggtggcgggcacggctatactcgtaacggct
gatttaaagctggaaggggaagcactgcgtcttaccgctacagatattgtggatttggaa
gcggctgcagcgcaagggcaaagcgaaatgcgggtatggctggaaaagccagatgccttg
ccagatttgcaagctattctggagccgcaaaagggtggggcagggcggattgttctgctg
ccgggggttgctgatagttgtgatgtagaggtgcggttgcgtgggcgctataaggtgaca
cctgtattggggcaaaggctgcgcacactttctggtgtttcacgggtagaacaggtctga
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