Acetobacter pasteurianus IFO 3283-01-42C: APA42C_20312
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Entry
APA42C_20312 CDS
T01818
Name
(GenBank) DNA polymerase III exonuclease epsilon subunit like protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
apw
Acetobacter pasteurianus IFO 3283-01-42C
Pathway
apw03030
DNA replication
apw03430
Mismatch repair
apw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
APA42C_20312
03430 Mismatch repair
APA42C_20312
03440 Homologous recombination
APA42C_20312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apw03032
]
APA42C_20312
03400 DNA repair and recombination proteins [BR:
apw03400
]
APA42C_20312
Enzymes [BR:
apw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
APA42C_20312
DNA replication proteins [BR:
apw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
APA42C_20312
DNA repair and recombination proteins [BR:
apw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
APA42C_20312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
DUF485
DNApol_Exo
HTH_8
WHD_ORC
Motif
Other DBs
NCBI-ProteinID:
BAI18374
LinkDB
All DBs
Position
2117302..2118333
Genome browser
AA seq
343 aa
AA seq
DB search
MIIFITFIFISSSINAFLAYRLNRSITQWILAGIIFPFFSFVLLWSLPKRGESKVDKVDK
VDKVDKVDKVDKVDKVDKVDKVDGNLPQKESEHILENIRKNKVENEKLIEIANRIREEKI
SKNKLYIKGKNKPLFVDVETTGLHSDDQIVSICMILLYADKSQELQKLTYKSLYYIFDPC
KKSHPIAEGIHGYNDWTLRHQNLFEEKMEHILSFIEESDVIVAHNVNFDMKFIRNSFANA
KIDIGKIGTMCTMEMHGGSLSACSKRLGIQRKTSIHDAAEDVLMCMCLYLEKMSNINVLD
MYHSFTLPKLKNFIEPPPVPDGKLPRRNNIKKRNEILGEKFIK
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgattatttttattacttttattttcatatcatcctcaataaatgcctttttagcatac
cgcctaaatagaagtattactcagtggatactcgctggaataatatttccatttttttca
ttcgtattgttgtggtctttacctaaaagaggagaaagcaaggtcgataaggtcgataag
gtcgataaggtcgataaggtcgataaggtcgataaggtcgataaggtcgataaggtcgat
aaggtcgatggtaatctgcctcagaaagaatctgaacacattttagagaatattaggaaa
aataaagtggaaaatgaaaaactaatcgaaattgccaatagaataagagaggaaaaaata
tcgaaaaacaaactttatataaaagggaaaaataaacctttatttgttgatgttgaaaca
actggtcttcatagtgatgatcaaattgttagcatatgtatgattttattatatgccgat
aaaagccaagaactgcaaaagctaacatataaaagtttatattatatatttgacccttgt
aaaaaaagtcatcctatagctgaaggtatacatggatataatgactggacattaaggcat
caaaatttatttgaagaaaaaatggagcatatattatctttcatagaagaaagtgatgtt
atagttgcgcataatgtcaattttgacatgaaattcatccgaaattctttcgcaaacgct
aaaatagatatcggtaagattggtacaatgtgcacaatggaaatgcatggaggtagctta
tctgcatgctctaaaagattgggaatacaaagaaaaacatcaattcatgatgcagctgaa
gatgttctcatgtgtatgtgtctatatttggaaaagatgagcaatattaatgttttagat
atgtaccatagctttactcttccaaagctgaaaaattttattgaaccgcctcccgttcca
gatggaaaacttccccgtagaaataatatcaaaaaacgtaatgaaattttaggagaaaaa
tttattaaataa
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