Acetobacter pasteurianus IFO 3283-26: APA26_00540
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Entry
APA26_00540 CDS
T01816
Symbol
recR
Name
(GenBank) DNA recombinase RecR
KO
K06187
recombination protein RecR
Organism
apx
Acetobacter pasteurianus IFO 3283-26
Pathway
apx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
APA26_00540 (recR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apx03400
]
APA26_00540 (recR)
DNA repair and recombination proteins [BR:
apx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
APA26_00540 (recR)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
APA26_00540 (recR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
RecR_ZnF
RecR_C
Toprim
Motif
Other DBs
NCBI-ProteinID:
BAI10405
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All DBs
Position
54407..55003
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AA seq
198 aa
AA seq
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MGGQEIEQLIRLLGRLPGFGPRSARRVALYLLKEPQTRLAPLAHAMERAGNAIKTCSSCG
NLDTIDPCHICSDPLRDQGLICVVETVGDLWALERAGVHRGVYQVLGGTLSPLAGIGPED
LDVAPLFEKLNKGTVREIILALGATVEGATTMHWLMDQLAPYGGVTVSRVAQGVPMGGAL
DVLDDGTLAAALGARRPA
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgggtgggcaggaaatagagcagcttatccggcttttgggccggttgccggggtttggc
ccgcgttctgcgcgcagggttgcgctgtatttgctgaaagaaccgcaaacccggcttgcg
cctctggcgcacgcaatggagcgggcaggcaatgccataaaaacctgctcatcctgcggt
aatctggatacgatagatccatgccatatctgctctgatcctttgcgagatcagggtttg
atctgtgttgtggaaacggtgggtgatctgtgggcgctggagcgtgctggtgtgcatcgt
ggagtgtatcaggttttaggcggcacactctctccgttggcgggtattgggccggaagat
ctggacgtagccccgctgtttgaaaagctgaacaaaggcacagtgcgcgaaattattctg
gcattaggcgcaacggtagaaggggccaccaccatgcattggctgatggatcagcttgcg
ccttatggtggtgtaaccgtcagccgtgttgcgcaaggcgtgcccatgggtggggcgctg
gatgtgctggatgatggcactctggccgcagcgctaggcgcacggcgccctgcatga
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