Acetobacter pasteurianus IFO 3283-26: APA26_09552
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Entry
APA26_09552 CDS
T01816
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha subunit (variant)
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
apx
Acetobacter pasteurianus IFO 3283-26
Pathway
apx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
apx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
APA26_09552 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apx03021
]
APA26_09552 (rpoA)
03400 DNA repair and recombination proteins [BR:
apx03400
]
APA26_09552 (rpoA)
Enzymes [BR:
apx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
APA26_09552 (rpoA)
Transcription machinery [BR:
apx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
APA26_09552 (rpoA)
DNA repair and recombination proteins [BR:
apx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
APA26_09552 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
BAI11298
LinkDB
All DBs
Position
988494..989513
Genome browser
AA seq
339 aa
AA seq
DB search
MVLQKNWQSLIKPEKLEVESGVEPARIATVVAEPLERGFGMTLGNALRRVLLSSLQGAAV
TAVQIDGVLHEFSSVAGVREDVTDIVLNIKQLALRMHGEGPKRMMLTATGPGEVRARQIQ
TGHDIEIMNPDLVICTLDDGVKLGMEFIVNMGKGYVPAAANRPEDAPIGLIPVDAIYSPV
KRVSYKVEPTRVGQVTDYDKLLLTVETNGAVTPEDAVALAARILQDQLQLFINFDEPRPV
QAEEPEDDQPFNRNLLRKVDELELSVRSANCLKNDNIIYIGDLVQKSEQEMLRTPNFGRK
SLNEIKEVLTSMGLSLGMNVPAWPPENIEELAKRLDEPF
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
ttggtccttcagaaaaactggcaatctctgatcaagcctgaaaagcttgaggtcgaatcc
ggtgtggagccagcacgcatcgcaaccgtggttgcagaacctctggaacgcgggttcggg
atgacactggggaatgcgctgcggcgtgttctgctgtcctcgcttcagggtgcggctgtt
actgctgtgcagattgacggcgtgctgcatgagttctcgtctgttgcaggcgttcgggaa
gatgtcacggacatcgtgctgaacatcaagcagctggcattgcgtatgcatggcgaaggg
ccaaagcgtatgatgctgacggccacaggccccggcgaagtgcgtgcccgtcagatccag
accggccatgatatcgagatcatgaaccccgatcttgttatctgcacgctggacgatggc
gttaagctgggcatggaatttattgtaaatatgggtaaaggctatgtgcctgccgcggct
aaccgcccggaagatgcaccaattggcctgattccggtggatgcaatttattcccccgta
aagcgcgtgtcttataaagttgagcctacccgcgttggacaggtgaccgactatgataag
ctgctgctgacggttgaaaccaatggtgctgtaacacctgaagatgctgtggctctggct
gcacgtattctgcaggatcagctccagctgttcatcaactttgatgaaccgcgccctgtg
caggctgaagagcctgaagatgatcagccgttcaaccgtaatctgctgcgtaaggtggat
gagcttgaactgtctgttcggagtgcaaactgcctgaagaacgacaacatcatctacatt
ggggatctggtgcagaagagcgagcaggaaatgctccgtactccgaactttggccggaaa
tccctgaacgaaatcaaggaagttctcacctctatggggctgtccttgggtatgaatgtg
ccggcttggccgccggaaaatattgaagagctggcaaagcggcttgatgagccgttttga
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