Acetobacter pasteurianus IFO 3283-26: APA26_12340
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Entry
APA26_12340 CDS
T01816
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
apx
Acetobacter pasteurianus IFO 3283-26
Pathway
apx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
apx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
APA26_12340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apx03400
]
APA26_12340
Enzymes [BR:
apx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
APA26_12340
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
APA26_12340
DNA repair and recombination proteins [BR:
apx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
APA26_12340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
BAI11577
LinkDB
All DBs
Position
complement(1294275..1295114)
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AA seq
279 aa
AA seq
DB search
MPELPEVETVMRGMQIALQNGTIKEAIVRRHDLRWRIPADFSQTIKGRRIEGFRRRGKYI
LMRLSGGMSIIWHLGMSGRVLLDSPTEPLPHEHVVLILQDGKRCGYIDPRRFGMLDLVPT
DQEDTYPLLVGMGPEPLEPDFTPKTLLAASKNRRMPIKPFLLDQKVVAGLGNIYVCEALF
RAGIAPTMPACNLTPPKACKLAQAIRDVLEEAIEAGGSSLKDYVRPEGGLGYFQHAWRVY
GQTGKPCPNCPGTPACSGVQQITQAGRSTFFCPQRQKNG
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactccctgaagtagaaaccgtaatgcgcgggatgcagattgccctgcaaaac
ggtaccatcaaagaagcaattgtgcgccgtcacgacctgagatggcggattcctgccgat
ttctcacaaacaatcaaaggccgccggatagaaggctttcgtcgccggggcaaatatatt
cttatgcgcctgtctggtggaatgtccataatctggcatttgggtatgtctgggcgtgtg
cttctcgattctccaaccgagccgttaccgcatgaacacgtcgtgctgattctgcaggac
ggaaagcgctgcgggtacatagatccgcgccggtttggtatgctggacctggtgcccaca
gatcaggaagatacctacccattgctggtaggcatggggcctgagccacttgagccagat
tttacccccaaaaccctactagcagccagtaagaacaggcggatgcctatcaaacctttt
ctgcttgatcagaaggttgtggcggggttgggcaatatttatgtgtgcgaggccctgttt
cgggctggcattgctccaaccatgccagcctgcaatcttacgccccccaaagcctgcaaa
ttggcgcaagccatacgagatgtgctggaagaggccatagaagcgggtggctccagcctg
aaagattatgtgcggccagaaggcgggctaggatacttccagcacgcatggcgggtatat
gggcaaacgggcaaaccatgccccaattgccccggcacccccgcatgttctggcgtgcag
cagataacacaggccggacgatccacatttttttgtccccaaaggcagaaaaacgggtaa
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