Acetobacter pasteurianus IFO 3283-26: APA26_17220
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Entry
APA26_17220 CDS
T01816
Name
(GenBank) ribosomal RNA large subunit 23S rRNA pseudouridine synthase C
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
apx
Acetobacter pasteurianus IFO 3283-26
Brite
KEGG Orthology (KO) [BR:
apx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
apx03009
]
APA26_17220
Enzymes [BR:
apx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
APA26_17220
Ribosome biogenesis [BR:
apx03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
APA26_17220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
NfeD
Motif
Other DBs
NCBI-ProteinID:
BAI12046
LinkDB
All DBs
Position
complement(1862191..1863177)
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AA seq
328 aa
AA seq
DB search
MSVVNRTVSEDEAGIRLDRYFRRHYPHLTQGALQKLCRTGQIRVEGKRVEASTRLEPGQT
VRVPPIPMAAKPARDVPRPLDEKLAREIRKMVVYQDKHVIALNKPAGLAVQGGPGITKHV
DMMLDGLREEDDPRPRLVHRIDKDTSGLLLLARTPGVAAKLAASFRGRDVKKIYWAVVVG
RPDPLSGEIDQPLARLGAGPGSITVAADRKDADAQSARSVYEVLDSAARKFSWLELSPLT
GRTHQLRVHCESLGTPILGDPKYGGAAAHPSGFTDRLHLHARMLDMPHPAGGRLTVSAEL
PPHMRETFRTLGFVPGTTPPPSRRGGQG
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttgtcaatcgtaccgtaagcgaagacgaagctggtattcgtctggatcgctat
tttcgccgccattacccgcatcttacgcagggggcgcttcaaaaactgtgccgcacgggc
cagattcgtgttgagggcaaaagggtagaagcctccacccggctagagccggggcaaacg
gtgcgcgtgccgcccatacccatggctgccaaacccgcgcgcgatgtgccgcgcccgctg
gatgaaaaactggcgcgcgaaatccgcaagatggtggtgtatcaggacaagcacgtgatt
gcccttaacaagcccgcagggcttgccgtgcagggtggccccggcattaccaagcatgtt
gacatgatgctggatggcttgcgggaagaagatgatccgcgcccacggctggtgcaccgg
attgataaagatacctccggtcttctgctgttggcgcgcacccccggtgtggccgccaag
ctggcggcatctttccgtggccgggatgtaaaaaaaatctactgggcagttgtggtcggg
cggcctgatccactttcgggcgagatagatcagccgttggcccgtttgggtgctggcccc
ggttccattaccgtggcggcggaccgtaaggatgccgatgcgcaatctgcacggtctgtt
tatgaagtgctggattcggctgcgcgcaagttttcttggctggagctttcaccgcttact
gggcgcacgcatcagctccgtgtgcattgcgaatctttaggcacacctattttgggtgat
cccaaatacggtggagcggcagcccatccttctggctttacagacaggttgcatctgcat
gcccgtatgctggatatgccgcacccagcaggtgggcgtttaactgtaagtgccgaattg
ccgcctcatatgcgtgaaaccttccgaactcttgggtttgtgccgggcaccacaccgcca
ccttcacgccgtggtggccaaggataa
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