Anaplasma phagocytophilum HZ2: YYU_00315
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Entry
YYU_00315 CDS
T02753
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
apy
Anaplasma phagocytophilum HZ2
Pathway
apy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
YYU_00315 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apy03021
]
YYU_00315 (rho)
03019 Messenger RNA biogenesis [BR:
apy03019
]
YYU_00315 (rho)
Transcription machinery [BR:
apy03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
YYU_00315 (rho)
Messenger RNA biogenesis [BR:
apy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
YYU_00315 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
OB_RNB
AAA_25
AAA
ATPase_2
AAA_22
NACHT
DnaB_C
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
AGR78578
LinkDB
All DBs
Position
70587..71945
Genome browser
AA seq
452 aa
AA seq
DB search
MCGKVRRRKKAVPSAVVAEEATGSGSEEGRILNLCELKRKSTGELLAIAEELGVVSNGRM
LKQEIIFQLMKRVISEGGVAIGGGVVETLPDGFGFLRSAEANYAASSDDIYISAGQIKKF
NLRTGDIVSGEIRAPGDKERYFTLVKAYSINYTEIGKLQRYVHFDDLIPVYPEDRILLEC
NKGAGNEKKDISMRAIDIIAPLGKGQRALIVAPPRVGKTVILQQIAHSIAVNHPNMELIV
LLIGERPEEVTDMLRSVKGEVVSSTFDEPAYRHVQLAEIVIERAKRMVEHKKEVVILLDS
ITRLARAYNEVMPSSGKVLTGGVDSNALQRPKRFFGAARNIENGGSLTIIATALIETGSK
MDEVIFEEFKGTGNCEIILDRKIADKRIYPAIDISKSGTRKEDMLIESALLKKVWLLRRL
LSAMGPVEAMEFLRDKLSMAKDNNDFFEMMNS
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtgtgtggcaaggttaggagaaggaaaaaggctgttcctagtgctgtagtagcagaagag
gcgacagggagtggcagcgaagaaggaagaatcctgaacctatgtgagctgaagagaaaa
agcacaggggagctactagcaatagcggaggagctaggtgtagtaagcaacggcaggatg
ctgaagcaagagataatattccagctgatgaagagagtaatcagcgaaggaggagtggca
ataggtggtggtgtagtagaaacattgccggatggatttggatttttgagatcagcagaa
gcaaattacgcggcaagtagcgatgacatctacatatcggctggtcagataaagaaattt
aacttgagaacgggtgacatagtaagtggtgagatacgtgcacctggagataaggaaagg
tattttaccttagtcaaggcgtacagcataaactacacggagataggtaagctacagagg
tatgtacactttgacgatctgattccagtatacccagaagatagaatattgctcgagtgc
aataagggtgctgggaacgagaagaaagatataagcatgcgtgctatagacataatagcg
ccactaggaaaggggcaacgtgcgctaatagtagcacctccaagggttggtaagactgta
atcttgcagcaaatcgcgcactctatagctgtaaaccaccccaacatggaactgatagtg
cttttgataggtgaaaggccagaagaagtcacggatatgttgaggtcagtaaagggagaa
gttgtaagttctacatttgatgagcctgcgtaccggcacgtacagttggcagagatagtg
atagaaagagctaagaggatggtagagcataagaaggaggtggtaatccttttagactct
ataacaagattagctagggcatataatgaggttatgccatcatcaggaaaggtgcttaca
ggtggggtagattctaatgcgctacagaggcctaagaggttttttggagcagctaggaat
atagagaatgggggatcgctcacgataatagcgactgctctaatagagacgggatcgaaa
atggatgaagtgattttcgaggagttcaagggtacaggaaactgcgagataatacttgat
cggaagatagcagataagagaatctacccagcgatagatatatctaagtctggaacaaga
aaggaagacatgctgatagaatcagcgcttctgaagaaggtatggttactgagaaggttg
ttatcagccatgggtccagttgaggctatggagtttctgagagacaagcttagcatggct
aaggataacaacgacttttttgaaatgatgaatagctaa
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