Anaplasma phagocytophilum HZ2: YYU_04120
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Entry
YYU_04120 CDS
T02753
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
apy
Anaplasma phagocytophilum HZ2
Pathway
apy03420
Nucleotide excision repair
apy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
YYU_04120
03430 Mismatch repair
YYU_04120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apy03400
]
YYU_04120
Enzymes [BR:
apy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
YYU_04120
DNA repair and recombination proteins [BR:
apy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
YYU_04120
MMR (mismatch excision repair)
Other MMR factors
YYU_04120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_11
Viral_helicase1
ResIII
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AGR78941
LinkDB
All DBs
Position
965613..967592
Genome browser
AA seq
659 aa
AA seq
DB search
MEYRDFPQANCTSQQVEEHYPEDFMLNLNAEQKEAVLQVAGPVLILAGAGTGKTRTITAR
MGHIIKEGYAQPHEILAVTFTNKAAKEMLSRVNNIVTASGIWLGTFHAIAARILRSHAEL
VGLSSNFTIISPDDQLQITKTIAADMQQGYPATECKGILHTIQRWKEKGLLPHDITETEL
QRSSNSFALRVYEEYQERLKALNCADFGDLLLHNVTILSANPDVLAHYQEHLRYVMVDEY
QDINTIQYLWLRLLVRRHKNLCCVGDDDQSIYNWRGAEVGNILRFSDDFPDAKVIRLECN
YRSTSNILASASAIIDNNKSRLKKTLWTHNQAGQKVGLMKFFDGRLEAQYISEHIKSSYD
YKFSETAVLVRASFQTRVFEEFFVRYGIPYKIIGGTKFYDRVEIRDLVAYLKVVVNPNND
IAFEKIINKPKRKLGTSTVNKLRAYGRKHSISLTEAGHSMIKDGLLSDNTSNILQDLLKQ
FDDWREMLSRDSSVNVLKAIAHDSGYIESLKKDGESGLSRIENIKELFSAVSGFDDVSKF
LEHISLVAENDSLEEDNNYVHVMTLHAAKGLEFPLVFLPGWEEGVFPHEKSMNDITGNAL
EEERRLAYVGITRAREQLYISCAAMREINNWSQSMKMSRFIKELPREHVQVLHNMTGYA
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggaatatcgcgattttccgcaagcaaactgcacatctcagcaggtcgaagaacattac
cctgaagacttcatgctcaacctaaatgccgaacaaaaagaagcagtgctgcaagtagca
ggcccagtcttgatcttggcaggcgcaggtactgggaaaactcgcacaataaccgctaga
atggggcatataataaaagagggatatgcacaacctcacgaaattctcgcagttacattc
acaaataaggctgcaaaagaaatgctctctcgagttaataatattgttactgcttctggc
atatggctcggaacatttcacgcaatagctgcgcgtattttgcgtagccacgcagaattg
gtaggattaagcagcaatttcacgataataagccctgatgatcagctacagatcacaaag
acaatagcggcggatatgcaacaaggttatccagccacagaatgcaaaggcattctccat
actatacagaggtggaaagagaaaggactattgcctcatgatattactgaaacagaatta
caaagatcttctaacagttttgctcttagagtatacgaagaataccaagaacgccttaaa
gccctaaattgtgccgattttggtgatttattactccacaacgttactatacttagtgca
aatcctgatgtccttgcgcattatcaagaacaccttagatatgttatggttgatgagtat
caagacatcaacacaatacaatatctgtggcttcgcttactagtgcgtcgacataaaaac
ctatgctgcgtaggagatgatgatcaatccatatataactggagaggagcagaagtcggc
aacatactcagattttcagatgatttcccagacgctaaagtaataaggctggaatgtaat
tataggtcaacgtctaacatattagcctcagcatcagcgataattgataataataaatcc
cgccttaaaaaaacattatggacgcacaatcaggcaggacaaaaagttggtttaatgaag
ttcttcgatggacggctcgaagctcaatacattagtgagcatattaagagctcttacgat
tataaatttagtgaaactgctgttctagtaagagccagctttcagactagagtcttcgag
gagttcttcgtaagatatggtataccttacaaaattatcggcggaaccaagttctatgat
agggtagaaatccgcgatcttgttgcatatctcaaagtagtagtcaaccccaataacgac
atagcgtttgagaaaattataaataagcccaaacgcaagctcggaacttctactgtcaat
aagcttcgtgcatatgggagaaagcacagtatttccctaactgaagccggacactcaatg
ataaaagatggattactatctgataatacatccaacattctgcaagatcttctcaagcag
tttgatgattggagagaaatgttaagtagagattcatccgtcaatgtactaaaagctatt
gctcatgactctggatatatagaatctctaaaaaaagacggggaatcaggtctatcaaga
atagagaacataaaggaactcttctcagccgtatcaggattcgatgatgtgtcgaagttt
ttagaacacattagcttagtggcagaaaatgattctttagaagaagacaataactacgta
cacgttatgacattacatgccgcaaaggggttggagttcccgttggttttcctccccgga
tgggaggaaggagtcttcccacacgaaaaatccatgaatgacataactggaaacgctctg
gaagaagagaggcgcttagcctatgttggcataacaagagctagagagcagctatacata
tcatgtgctgcaatgagagaaatcaataactggagccaatccatgaaaatgtctcgtttc
ataaaggaactccccagagaacatgtacaggtgctgcataatatgactggttacgcgtag
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