Anaplasma phagocytophilum HZ2: YYU_04700
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Entry
YYU_04700 CDS
T02753
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
apy
Anaplasma phagocytophilum HZ2
Pathway
apy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
apy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
YYU_04700 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apy03021
]
YYU_04700 (rpoB)
03400 DNA repair and recombination proteins [BR:
apy03400
]
YYU_04700 (rpoB)
Enzymes [BR:
apy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
YYU_04700 (rpoB)
Transcription machinery [BR:
apy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
YYU_04700 (rpoB)
DNA repair and recombination proteins [BR:
apy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
YYU_04700 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AGR78987
LinkDB
All DBs
Position
complement(1093233..1097390)
Genome browser
AA seq
1385 aa
AA seq
DB search
MSSAGDSGPGYVLNDFDAVPRLSYARSIDIRDSLSDLISIQRDSYDAFIGIDEGSSGGIQ
SIFQSMFPIRDPLGRAVLEFVSCNIGEPQYDEYECIKRGITFSVPMRITLRFVVWKVQEV
SFKEVKYVVDEGTLERSVKYMKEQEVSIGDLPMMTSYGTFIINGIERVIVSQMHRSPGVF
FDSDKGKTYSSGKLIYSARIIPYRGSWLDFEFDIKDIIYFRIDKKRKLPVTYLLKALGMS
NNDILDTFYDKVLYVRSDKGWKVPFVVDRFKGVRLSYDLMDVDGNVLIKANTRITLRIAK
KLYADGLREYLVPFAGISGLFVATDLVDPASGAVIVSAGEAIAAEHIVKLELFDISEIAF
LNIDFLTVGPYVLNTLFLDRHITQEDALFEIYRVLRSGESPNLEAVKSFFKGLFFEPDRY
DLSVVGRIKLNSHLRLDIDENLTVLTKDDIVHVIKKLVLLRDGDGEGVVDDIDHLGNRRV
RSVGEFIENQFRVGILRLERMIMDYMSSVNFDNAVPCDFVNPKILATVLKDFFSSSQLSQ
FMDQTNPLSEVTHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGQNIGLIS
SLAIYAKINKYGFIESPYRKVIDGVVTDSVEYLLATQESDYYIADAGAALDENNRFVDDM
LYCRHGGNFVMVKREDVNYIDVSPKQIVSVAASLIPFLENNDANRALMGSNMQRQAVPLL
KAEAPLVGTGMESVVAAGSGAVVLAKRDGVVHRVDGSYIVIRAFDKNKDEYLGVDIYKLR
KFQRSNHNTCINQRPIVKIGDYVRTNDVIADGAAIDRGELALGKNVLVAFMSWQGYNFED
SIVISSDVVKRDVFTSIHIEEFECVVRDTPLGPEKIMRSVPDVNEESLSHLDDVGIVNIG
AEVSAGSVLVGKVTPRPPVSLPPETKLLVTIFGEKVFDCVDSSLYLPPDVEGTVIDVHVF
VRRGVEENDRSLLIKQSEVNSFRKERDYEIDVVSEYFYDELKKLLCSADLPLNGHADVES
LLAAKSLEALWEIGLSNPKISAKVADMKGKFDELITEAHSKFDQKIDKLNYGYDLPQGVL
TIVKVFVAVKHNLQPGDKMAGRHGNKGVISRIVPVEDMPHLEDGTPVDIILNSLGVPSRM
NIGQILETHLGWAAVNLGHRVGRMLDSGEEEGPVVESIRSFLSEVYEGQKLKEDVASMSD
EALLKFANRLRRGVPMAAPVFEGPKDAQISRLLELADVDPSGQVDLYDGRSGQKFDRKVT
VGYIYMLKLHHLVDDKIHARSVGPYGLVTQQPLGGKSHFGGQRFGEMECWALQAYGAAYT
LQEMLTVKSDDIVGRVRIYESIIKGDSNFECGIPESFNVMVKELRSLCLDVVLKQDKEFT
SSKVE
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgcgggtgattctggtcccgggtatgtgctgaatgattttgatgctgttcct
aggctttcttacgcgaggtctatagacattcgcgattctttgagtgatttgataagtata
cagagagattcttatgatgccttcatagggattgatgagggtagtagtggcggtatacaa
agcatattccagtcgatgtttcccatacgagatcctttggggagggctgtactcgagttc
gtgagttgtaatattggggagcctcaatatgatgaatacgagtgcataaaacgtgggata
acgttttctgtgccgatgcgcataactcttcgttttgttgtgtggaaggtgcaggaggtt
tcattcaaggaagttaagtacgtcgtagatgagggcactcttgagaggagtgttaagtac
atgaaggagcaggaggtgtctattggcgatcttccgatgatgacatcatatggaaccttc
atcatcaatggtatagagagggttattgtttcccagatgcatcggtctcctggtgtcttt
tttgacagtgataaggggaagacatacagttctgggaagctaatttattctgcgcgtatc
atcccttacaggggctcgtggcttgattttgaatttgacatcaaggacatcatttacttc
cgaatagataaaaagcgtaaactcccggtcacctacttattaaaggcccttgggatgtct
aacaatgatatcctagacacattttatgacaaagttctttacgtaagaagtgataagggt
tggaaggtaccctttgtagtggatcgctttaagggtgtgaggctgtcttatgatcttatg
gacgtagacggtaatgtgctgattaaggcgaatactaggattactctcaggattgctaaa
aagttatatgctgatggcttaagggaatatttggtgcctttcgcggggatttctgggttg
ttcgtggcaactgacttggtggatcctgctagtggtgctgtgattgtttctgcgggtgag
gcgatagctgcggagcacattgtaaaattagaattgtttgatatcagtgagatagcgttt
ttgaacatagactttttgacagttggtccttatgttctgaatactctatttttggacagg
catataacgcaagaggatgcgctgtttgagatatatagggtattgcgttctggagaatct
ccaaatttagaagctgtgaagtcattctttaaagggctcttttttgagccagataggtat
gatttgtcagttgttggaagaattaagctgaacagtcatttgcgcttagatatagatgag
aatctcactgtccttactaaggatgacatagtacacgtaataaagaagttggttttattg
cgtgatggtgatggtgagggtgtagttgatgatatagaccatcttggtaataggcgggta
aggtctgtaggggagttcatagagaatcaattccgggttggtatattgcggctcgagaga
atgattatggattacatgtcctcggttaactttgataatgcggtgccgtgtgactttgtt
aatcctaagatcttggctacggtgttgaaagactttttcagttcttcgcagctttcgcag
tttatggatcagactaatcctctctcagaggttacgcataagcgtaggttatcggcgttg
ggtcctggtggtttaacgagagaaagggctggttttgaagttcgtgacgttcaccctacg
cactatggtaggatatgtcctattgaaactccggaaggacagaatattggtcttattagt
agtctcgctatatatgctaagataaacaagtatggctttattgaaagcccgtacaggaag
gttattgatggcgtagttactgattctgtagagtatcttttggctacacaggagagtgac
tattatattgctgatgcgggcgctgcccttgatgagaataaccgttttgtggatgatatg
ctgtattgtcgccatggcggtaacttcgtgatggtgaagcgtgaagacgtgaattacatt
gatgtatctccaaagcagatagtttctgttgcagcgtcgctgattccgtttttggaaaac
aatgacgcgaaccgtgctctaatgggttcaaatatgcagcgtcaggcggtgccattacta
aaggctgaagcgcctttggtgggtactggtatggaatcagttgttgcggcaggttcaggt
gccgtcgtattggctaagcgcgatggtgtagtacacagggttgacgggtcttatatcgta
atcagggcttttgataagaataaggacgagtatcttggtgttgatatatacaaactgaga
aagttccagcgttcaaatcataatacatgtatcaatcagaggcctatagttaagataggg
gattacgttaggactaatgatgttattgccgatggtgccgctatagatcgtggtgagttg
gcgttgggtaaaaatgtccttgttgcctttatgtcatggcagggttacaactttgaggac
tcgatagtaatatccagtgatgttgtgaagagggatgtcttcacttcaattcacatagaa
gagtttgaatgtgttgtgcgggatactccgcttggtcctgagaagatcatgcgttcggtg
ccggatgtgaatgaggaaagtctcagtcatctggatgatgttggtattgtaaatatcggg
gctgaggtttctgctggtagtgttttggtgggtaaagtgactccgagaccgccggtttca
ttgccgcctgagacgaagcttttggtgacaattttcggtgagaaggtattcgattgcgtt
gattcttctttatatttgccgccggatgttgagggaacggttatagacgttcatgtgttt
gttagaaggggcgttgaggagaatgatagatctttgcttatcaagcaaagtgaggtgaat
agcttcaggaaggagcgtgactacgaaatagatgttgtcagtgagtacttctatgatgag
ctgaagaagttgctttgtagtgctgatttgccgttgaatggtcatgctgatgtagagagt
cttctagctgcgaagtctttggaagcgttatgggaaattggtctatcgaatcctaagata
tctgccaaagttgctgatatgaagggtaaatttgatgagttgattactgaagctcatagt
aaatttgaccaaaagatagacaagcttaattacggctatgatttgccgcagggtgttctg
actattgtaaaggtctttgtggctgttaagcataatttgcagccaggagataaaatggct
ggtcggcatggtaacaagggggttatttcgagaatagttcctgttgaggatatgccgcat
ctagaggatggtacgcccgtggatataatcttgaattctctgggtgtaccttcgcgtatg
aatatagggcagatccttgaaactcacttgggttgggctgcagtgaatttgggtcatagg
gtaggtaggatgcttgattcaggggaagaagaagggccggtagttgagagtattcgtagc
tttttgagcgaagtatatgaagggcaaaagcttaaggaagatgtggcttctatgtcggat
gaggctttgctgaagtttgccaataggctcagaagaggtgttcctatggctgctccggtg
tttgagggtccgaaggatgcgcagatttcccggcttttggaattagcggatgttgatccg
tctgggcaggtggatctttatgatgggcgttcagggcagaagtttgatcgcaaggtaact
gttggatacatttacatgttgaagctccatcacttggtggatgacaagatacatgctagg
tctgttggtccgtatggtctggttactcagcaacctcttggaggaaagtcgcactttggt
gggcagagatttggggaaatggaatgctgggcattgcaggcctatggtgctgcttatact
ttgcaggaaatgctaactgtcaaatctgacgatatcgtaggtagggtaagaatctatgaa
tccataattaagggggatagcaacttcgagtgtggtattcctgagtcgtttaatgtcatg
gtcaaggagttacgctcgctgtgccttgatgttgttctaaagcaggataaagagtttact
agtagcaaggtggagtag
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integrated database retrieval system
