Anaplasma phagocytophilum HZ2: YYU_04760
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Entry
YYU_04760 CDS
T02753
Name
(GenBank) Pmetallo-beta-lactamase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
apy
Anaplasma phagocytophilum HZ2
Pathway
apy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
YYU_04760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apy03019
]
YYU_04760
Messenger RNA biogenesis [BR:
apy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
YYU_04760
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
RMMBL
Lactamase_B_2
RNase_J_C
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
AGR78998
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Position
1105769..1107400
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AA seq
543 aa
AA seq
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MYVDDNKFLFLPLGGVGKIGMNVSLYHVHGKWIMIDLGAGFADPDSMPGVDLVVADISFI
RERRKDLVGVVLTHAHEDHIGAIPYLWEDLRCPIYATKFTASFVRSKVEQFSLNIPIVEV
DPGVPLELGPFTLEFVSMTHSIPEMHSIAVRTDLGSVLHTGDWKLDTNPVIGSVSDLEKL
KRLGDDGILAVVSDSTNIFTEGTSGSEGSLHDSILDIVKRCKNRVAISLFASNVARISTL
SRIAKETGRKVVVLGRSLSRALGAAHECGYLDDPENFLDGRENINLPKEKVLYLCTGCQG
EPMAATARLASGSHPFATLESGDTVIFSSKIIPGNERRIFRVFNKLVQQGVEVVTEFTES
VHVSGHPSRTDVRTLYSLLKPKLCLPVHGEYIHMYEHARLAEECGIERCIVSSPGNVIDL
VERKVVDTVDCGVYGVDGEFLRSADDSVISARRKMRDAGAVIVTLLMNRDHQLIREPLVI
APGALDSTEDHVLLSEVARKISAGVAGRRPKNIKGYIRNLVFAFLKDVVKGKPLVEVQLE
YVN
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtagacgataataagtttttgttcctgcctctgggtggtgtaggaaagattggt
atgaatgtttcgctttaccatgttcatggtaagtggataatgatagatctaggtgctggg
tttgccgaccctgatagcatgccgggtgtggatctagttgttgctgatattagcttcata
agagaaaggcgtaaggatctcgtaggtgtagttttgactcatgcacatgaagatcacata
ggcgctatcccttacctatgggaagatctaagatgtcctatatatgctacaaagttcact
gcatcttttgtaagatcaaaggtagagcagttttccttaaatataccgatagtggaggtt
gatcccggtgtgcctttggaacttgggcccttcacgttggagttcgtgagtatgacgcac
tctataccggagatgcactctattgcggtacgtacagacttgggaagtgttctacataca
ggagattggaagctagataccaatcctgtgattggttcggtatcagatttagaaaagctg
aagcgcctgggtgatgatggtattttggcagttgtttctgattccactaacatatttact
gaaggcacttcagggtctgaaggcagcctgcatgatagcatacttgatatcgttaaacgt
tgtaaaaatagggttgctatttcgttatttgcttccaacgtagctagaatatctactctc
agtaggatagctaaggagacgggaagaaaggtggtggtacttggtagatctttgtcacga
gctttgggggctgcacacgaatgtggctatcttgatgatccggaaaactttcttgatgga
cgtgagaatataaacctaccaaaggagaaggttctctatctttgtacagggtgtcagggc
gagcctatggctgctactgcacgtttagctagtggttcgcatccatttgctacgctcgaa
agtggtgatactgtcattttttcctctaagattattcctggaaatgaaagacgtatcttc
cgggttttcaacaagctagttcagcagggtgtggaggttgttactgaattcactgaatca
gtacacgtatcggggcacccttcaaggactgatgtgcgtactctgtattctctgctgaag
cctaagttgtgtctgcctgtacacggtgagtacatacacatgtatgagcatgcacgtttg
gctgaagaatgtggcatagaacgttgtattgtctcttctcctggaaacgtgatagatttg
gtagagagaaaggtagtagatactgtagactgtggagtttacggtgttgatggagagttc
ttgagatctgctgacgatagtgtcataagcgcccgtagaaagatgcgtgatgctggtgct
gtgattgtgacgctgttaatgaatagggatcatcaactgatcagggagcctcttgtgatt
gcgccgggagctctagatagtacggaagatcatgtgctactgagtgaagtggctcggaaa
attagcgcgggggttgcaggtcgtagacctaaaaacataaagggttatataagaaatttg
gtttttgcttttcttaaagacgtggtaaagggcaaaccattggtggaagtacagttggaa
tatgtcaattag
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