Anaplasma phagocytophilum HZ2: YYU_05380
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Entry
YYU_05380 CDS
T02753
Name
(GenBank) recombination protein RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
apy
Anaplasma phagocytophilum HZ2
Pathway
apy03410
Base excision repair
apy03430
Mismatch repair
apy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
YYU_05380
03430 Mismatch repair
YYU_05380
03440 Homologous recombination
YYU_05380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apy03400
]
YYU_05380
DNA repair and recombination proteins [BR:
apy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
YYU_05380
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
YYU_05380
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
YYU_05380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AGR79056
LinkDB
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Position
complement(1236503..1238260)
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AA seq
585 aa
AA seq
DB search
MLQSSAEEAVLCTGVSGAVWKVHNATYRDVLTIKQKFGLSEIVAHVLAIKRIPLDDIRDF
LFPTLKLLLPDPFHLLDMGKAVDRILKAIYEKERIVIFGDYDVDGATSSAMLKRYFKSIG
ATAEVYIPDRLKEGYGPNPEALIKLRKKGCSLCITVDCGTVAHEPISVARAAGLDVIVVD
HHIGSPTLPDATAIINPNRLDETSTYTYLSGVGTSFMLLIALNKTLRQAGYFQQENEPNL
MNYLDLVALGTVCDVMPMLKLNRAFVKQGLKVMSERGNMGLRTLADAIGIEEKPSVYHLG
FCIGPHINAGGRIGNSSLGARLLSSNDAIECNKIVTMLLDLNNERKEIENRSLAEALAQA
ELLVDEGKNIIMVTGNWHVGVIGIIAGRIKERFFLPTIVISLDGDMGKASARSVAGIDIG
AAVLSAKFEKLIPEGGGHEMAAGFSVHRSQIEPLYKFFLERFKDVNIQKALHASGILSTA
GISSALCRELQLLEPFGPGNPEPKFVLRNVRIKNPAIIGESHIKCLIDDGSGASVRGMCF
KCVGTELALGLLQGGIAVHLLGKVSMNQWRGNEYVQFIIDDLAFA
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgctacaaagctcagcagaagaagcagtcttatgtacgggagtaagtggagccgtatgg
aaggtgcataacgctacatatagggatgtactcacgataaagcagaagttcggactttct
gaaatcgtagcgcatgtcttagctataaaacgcatacctctagatgatattagagatttc
ttgtttcccactttaaagctgcttctgccggatcccttccatctgttggatatgggaaag
gctgttgataggatattaaaagccatttatgagaaagaaagaatagtaatttttggtgac
tatgatgttgatggggcgacctcttcggcaatgctcaagaggtatttcaaaagcatagga
gctactgcggaagtttacattcccgatcgcttaaaagaggggtatggaccaaatccagaa
gctctaataaaacttagaaagaagggatgtagtttatgtatcacagtagattgcggtact
gttgcgcatgaaccaatatcagttgctagggctgcgggattagatgtaattgttgtggac
caccacatagggtctcccacattaccggatgcgacggccattataaatcccaatcgcctt
gatgagacgtcgacttacacgtatttgtcgggtgtagggacttcctttatgttgttgatt
gcattgaataagactctgagacaagcagggtattttcagcaagaaaatgagccaaattta
atgaattatttggacttggtagctcttggtactgtttgtgatgtcatgccaatgctcaag
ttaaacagggcatttgtaaaacagggactaaaagtgatgtcagaacgaggaaatatgggg
cttagaactcttgccgatgcgataggtattgaagaaaagcctagtgtttatcatctcggt
ttttgcataggtccccacatcaatgcaggaggcagaatcgggaattcaagcttaggggcg
cggcttttatcaagcaatgatgctattgagtgtaataaaattgtcacgatgttgcttgat
ttgaataatgagagaaaagaaatagagaatagaagccttgctgaagcactggcgcaggca
gaactccttgttgatgaaggtaagaatatcatcatggtcacaggaaattggcatgttggg
gttataggaatcattgctggtcgcataaaagaacgttttttcttaccaacaattgtaatt
tctctagatggggacatggggaaagctagcgcgcgttctgtagcgggtattgacataggg
gctgctgttctatccgctaagtttgaaaaactaattcctgaaggtggtggacatgaaatg
gctgcaggattttccgtgcatagaagccagatcgagccactatataagttctttttagag
agatttaaagatgtaaatatacaaaaggctttacatgcgagtggtattttatcaactgcg
ggcatttcttccgcgttgtgcagagaattgcaattattagaaccgttcgggcctggaaac
ccggaaccgaaatttgtactcagaaatgttcgtataaaaaatcccgctattataggagaa
agtcacataaaatgcttaattgacgacggcagcggtgcttctgtgcggggaatgtgcttt
aaatgtgtaggaacagaactagctctagggttactacagggaggcatagctgtacattta
cttggcaaagtcagcatgaatcaatggcggggtaatgaatatgtacagtttataatagat
gaccttgcgtttgcgtaa
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