Aquimarina sp. AD1: D1815_02625
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Entry
D1815_02625 CDS
T05625
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aqa
Aquimarina sp. AD1
Pathway
aqa03420
Nucleotide excision repair
aqa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aqa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D1815_02625
03430 Mismatch repair
D1815_02625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aqa03400
]
D1815_02625
Enzymes [BR:
aqa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D1815_02625
DNA repair and recombination proteins [BR:
aqa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D1815_02625
MMR (mismatch excision repair)
Other MMR factors
D1815_02625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
ResIII
ATG17_like
Motif
Other DBs
NCBI-ProteinID:
AXT54699
LinkDB
All DBs
Position
546055..548385
Genome browser
AA seq
776 aa
AA seq
DB search
MEEYLAGLNDAQRAPVLQKDGPMIVIAGAGSGKTRVLTFRIAYLMNQGVDSFNILSLTFT
NKAAREMKKRIADIVGASEAKNLWMGTFHSIFAKILRIEADKLGYPSNFTIYDTQDSQRL
ISSVIKEMGLDKDIYKYKQVQSRISSYKNSLITVKAYFQNAELVEADAMAKRPRMGEIYQ
HYVDRCFKAGAMDFDDLLLKTNELLNRFPDVLAKYQNRFRYILVDEYQDTNHSQYLIVKA
LSDKFQNICVVGDDAQSIYAFRGANINNILNFQKDYDNVQQYRLEQNYRSTKNIVEAANS
IIDKNKTKLDKVVWTANDPGPKILVNRLLTDGDEGRYVASSIFENQMQHQLTNGQFAILY
RTNAQSRAMEDALRKRDIKYRIYGGLSFYQRKEIKDVLAYLRLIINPKDEEALKRVINYP
ARGIGATTVDKLVVAANHYDRSIFEVIENLDRINLKINSGTKTRLENFMNMIKSFQVTNQ
SSDAFVLSEMVAKNTGLLQELKKDGTPEGIARIENIEELLNGIRDFVEEQKELADETGTL
AEFLEDVALATDLDQDTGDDDRVALMTIHLAKGLEFPYVYIVGMEEDLFPSGMSMNTRSE
LEEERRLFYVALTRAEKQAYLTYTQSRYRWGKLVDAEPSRFIEEIDDQYLEYITPVDTYR
YKPLVDTDIFGEVDKSKLRLKKPVSGSPPVSHKPSEEQLRKLRKLRPVSNGTTSTPKTNL
FDGDLVPGTIVEHMRFGKGKVLQLEGVGQDKKAEINFENGGIKKLLLRFAKLKVIS
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
ttggaagaatatttagctggattgaatgatgcacaacgtgctcctgtactgcagaaagat
ggccctatgattgtgattgctggtgctggatcaggaaaaacgagagttcttacttttaga
atagcttatttgatgaatcaaggagtagattcatttaatatactgtctctaacctttacc
aacaaagcagcacgggaaatgaagaaacgtattgctgatattgttggtgcaagtgaggca
aagaatctatggatgggaacgtttcattctatttttgctaagatattaagaatagaagct
gataaattaggatatccatctaactttactatttatgatacgcaagattctcagagacta
atttcttcagtgattaaagaaatgggattggataaagatatttataaatataaacaagta
cagtctcgtatttcttcgtataaaaatagtttgatcacggtaaaagcatattttcagaat
gctgaattagtggaagcagatgccatggcaaaaagaccgcgaatgggagaaatctatcag
cattatgtagatcgatgctttaaagcaggtgccatggattttgatgatttattacttaag
actaatgaattattaaaccgttttccagatgttttagccaaatatcagaatcgttttaga
tatatattggtggatgagtaccaagatacaaatcattcacaatacttaattgtaaaagca
ttatcagataaatttcagaatatatgtgtagtaggggatgatgctcaaagtatatatgct
tttcgtggagcaaatattaataatattctaaatttccagaaggattatgataatgtacaa
cagtatagattggagcaaaattatcgatctacaaagaatattgttgaagccgcaaattct
ataattgacaaaaataaaacaaaacttgataaagttgtttggacagctaatgatcctggt
cctaaaatattagtaaacaggttgttgactgatggggacgaaggtcgatatgtagcaagt
tctattttcgaaaatcaaatgcaacatcaactgactaacggtcaatttgctattctttac
cggacaaatgcacaatccagagctatggaagatgcacttcgaaaaagagatattaaatat
agaatttacgggggattatcgttttaccaaagaaaagagattaaagatgttttagcatat
cttaggttgattatcaacccaaaagatgaagaagctttaaagcgagttatcaattaccca
gcaagaggaataggagctacaactgtggataaactggtagtagctgccaatcattatgat
cgatctatttttgaagttatagaaaatttggatcgtattaatcttaagattaacagtggt
acaaaaactagacttgaaaactttatgaatatgatcaagagttttcaggtaactaatcag
agttccgatgcctttgtgttatccgaaatggtcgctaaaaatactggtttactacaagaa
cttaaaaaggacggtacacctgaaggaattgcccgtattgaaaatatagaagaattgtta
aatggtattcgtgattttgttgaagaacagaaagaattagctgacgagacgggaactttg
gctgagtttctagaggatgtagcgttagctacagatttagatcaagatactggagatgat
gatagagtagctttaatgactatacatttagcaaaaggattagagtttccgtacgtgtac
attgtaggtatggaagaggatttatttccttctgggatgagtatgaatacccgatcagag
ttagaagaggaaagaagactgttttatgtagcacttacaagagccgagaagcaggcatat
ttaacttatacacaatctcgctatcgatgggggaaattagtagatgcagaacctagccgt
tttatagaagaaattgatgatcaatatttagaatatatcactccagtcgatacttatcgt
tataaacctttagtggatactgatatttttggcgaagttgataaaagtaaattaagactt
aaaaaacctgtttctggatcacctccggtttctcataaaccatcagaagaacaactacgt
aaattacgaaaactaagacctgtgtctaatggaacaacaagtactcctaaaacaaatctt
tttgatggagatttagtaccgggaactattgtagaacatatgcgttttggaaaagggaag
gttcttcaattagaaggagtagggcaagataaaaaagctgaaattaattttgagaatgga
ggtataaaaaagcttttattaagatttgcgaagttaaaagtgataagttaa
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