Aquimarina sp. AD1: D1815_08615
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Entry
D1815_08615 CDS
T05625
Name
(GenBank) ATP-dependent helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
aqa
Aquimarina sp. AD1
Pathway
aqa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aqa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D1815_08615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aqa03019
]
D1815_08615
03009 Ribosome biogenesis [BR:
aqa03009
]
D1815_08615
Enzymes [BR:
aqa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
D1815_08615
Messenger RNA biogenesis [BR:
aqa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D1815_08615
Ribosome biogenesis [BR:
aqa03009
]
Prokaryotic type
rRNA helicases
D1815_08615
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AXT55806
UniProt:
A0A3A9WVF2
LinkDB
All DBs
Position
1903056..1904825
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AA seq
589 aa
AA seq
DB search
MNKFEALGLGEAIIKAVNEMGFETPSEVQEKAIPILLNEETDIVALAQTGTGKTAAFGFP
LIEKVDIDSRITQGLILSPTRELCLQITNELKNYSKFSKGLRTVAIYGGASIHDQAKEIK
RGAQIIVATPGRMQDMINRKMVDISNIGYCVLDEADEMLNMGFYEDITSILSHTPEDKST
WLFSATMPKEVSTIAKRFMHNPIEITVGHKNTGSKNVSHEYYVVNSRDRYAALKRLADAN
PDIFSVIFCRTKRDTQKVAEKLIEDGYNAAALHGDLSQNQRDLVMKSFRNRQIQMLVATD
VAARGIDVDDVTHVINYQLPDEIETYTHRSGRTGRAGKSGVSMVIVSKSELRKIKSVERI
IKKKFEEKEIPSGEEICQVQLFHLANDIAKSEINDEIESYLPSINEVLEDFTKEELIKKF
FSVEFSRFHNYYKNSKDLNASRDSGGDGSRGRDGSTRYFINVGEKDGFDWMTLKDFLKEN
LGLGRDGVSRVDVKESFSFFNTDSEHQDAILAVFEDFRIEGRKVNVEISKDSGRSRGGRR
RRDNNGGGGFKGKRRSDGFKPKGRNRRDNDGGDRGGNGRRDRRKRSDRR
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatttgaagcattaggcctcggtgaagccattattaaggcggtgaatgaaatg
gggtttgagaccccaagtgaagtacaggaaaaggctatccctattttgcttaatgaagaa
acggatattgttgctcttgcacaaaccggaacaggaaaaaccgctgcatttggttttcct
ttaatagaaaaagtagacattgatagtagaatcacgcaagggttaatactatctcctacc
cgtgaactttgtttacagattaccaatgaattaaaaaactattctaagtttagtaaagga
ttgcgtactgtagccatttatggtggtgcaagtatccatgatcaagctaaagaaatcaaa
cgtggagctcaaattattgtagcaactccaggacgtatgcaggatatgatcaatagaaag
atggttgacatatctaatatcggttattgtgttcttgatgaagcagatgaaatgcttaac
atgggattctatgaagatataacttctatactttctcacacaccagaagataaaagtact
tggttattttctgctacaatgccaaaagaagtttctacaattgcaaaacgttttatgcac
aatcctatagaaattactgtaggacataaaaacacgggatctaagaatgtttctcacgaa
tattatgtggtgaactctagagatcgttatgcagctttaaaacgtcttgcagatgctaat
ccagatattttttctgtaatcttttgtcgtaccaaacgagacacacaaaaagttgcagaa
aaacttatcgaagatggatataatgccgctgccttgcacggagatctaagtcagaaccaa
cgagatttggtgatgaagagttttagaaatcgacaaattcagatgttagtggccaccgat
gttgctgcaagaggtattgatgtagatgatgttactcacgtgattaattatcaactacca
gatgagatagaaacctatacgcatagaagtggtagaacaggacgtgcaggaaaaagtggt
gtatctatggttatcgtttctaaaagtgaacttagaaagattaagtctgtagaacgaatc
atcaaaaagaaatttgaagaaaaagaaataccaagtggtgaagaaatatgtcaagtacaa
ttatttcatttagcaaatgatattgctaaatcggaaattaatgacgaaattgaaagctac
ttaccatcaattaatgaggtattagaagattttactaaagaagaacttattaaaaaattc
ttttctgtagaattctctcgttttcataattactataaaaactctaaagatctaaatgca
tccagagatagcggtggagatggatctagaggaagagacggaagcacgcgttattttatt
aacgtaggtgaaaaagatggatttgattggatgaccctaaaagatttcttaaaagaaaac
ttaggattaggaagagatggagttagtcgtgttgatgttaaggaaagtttttcattcttt
aatacagactctgaacaccaagatgcaattcttgcagttttcgaagattttagaatagaa
ggtagaaaagttaacgttgagatctctaaagattctggtcgaagccgaggcggtagacga
agaagagataataacggcggtggcggttttaaaggaaagagaagaagtgatggttttaaa
ccaaaaggaagaaaccgtcgtgataatgatggtggtgaccgcggaggtaatggaagaaga
gaccgaagaaaacgtagtgatcgtagataa
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