KEGG   Aquimarina sp. AD1: D1815_11545
Entry
D1815_11545       CDS       T05625                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
aqa  Aquimarina sp. AD1
Pathway
aqa02024  Quorum sensing
aqa03060  Protein export
aqa03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:aqa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    D1815_11545
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    D1815_11545
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    D1815_11545
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:aqa02044]
    D1815_11545
Enzymes [BR:aqa01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     D1815_11545
Secretion system [BR:aqa02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   D1815_11545
  Eukaryotic Sec-SRP protein
   D1815_11545
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N cobW Zeta_toxin CbiA AAA_22 nSTAND3 AAA_24 DO-GTPase1 CLP1_P APS_kinase AAA_33 Fe-ADH 6PF2K KTI12 TsaE ATP_bind_1 AAA_16 NACHT NPHP3_N AAA_31 AAA_18 SeqA_N
Other DBs
NCBI-ProteinID: AXT56359
UniProt: A0A3A9X7N7
LinkDB
Position
complement(2608201..2609529)
AA seq 442 aa
MFDNLSDKLDKALHILKGHGQITEVNVAETLKEVRRALVDADVNYKIAKDFTATVKEKAL
GQNVLKSLKPGQLMVKLVKDELTELMGGEVAGVNLSGNPSVVLMSGLQGSGKTTFSGKLA
NFLKNKKTKKPLLVACDVYRPAAIDQLHVVGEQINVEVFSDRGNNDPVAIAKAGVAHAKA
NGFNVVIIDTAGRLAVDEVMMTEIANIHKAVTPNETLFVVDSMTGQDAVNTAKAFNDVLN
FDGVILTKLDGDTRGGAAISIKSVVNKPIKFIGTGEKMEAIDVFYPSRMADRILGMGDVV
SLVERAQEQFDEEEARKLQKKIAKNQFGFDDFLKQIQQVKKMGNMKDLVGMIPGAGKMMK
NVDIDDDAFKHIEAIIHSMTPAERTKPQIINASRKKRIGKGSGTSVQQVNQLLKQFDQMS
KMMKMMQGGGGKRMMQMMGKMK
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgtttgataatttaagtgataagttagataaggcgttacatattcttaaaggccacggt
caaattacggaagtaaatgttgctgagacacttaaggaagttcgtagagcgttggttgat
gccgatgttaattataaaatcgccaaagattttacagctactgtaaaggaaaaagcatta
ggtcagaatgtactaaaaagtttaaaacctggtcaattaatggtgaaacttgtaaaagac
gagttaaccgaattgatgggaggagaagtagcaggtgttaatctttcgggtaatccttca
gtagttttaatgtctggattacaaggatctggtaaaactactttttctggaaaattagca
aactttctaaagaataaaaaaactaaaaaacctcttttagttgcttgtgatgtatatcga
ccagcagctattgatcagttacatgtagttggagaacaaataaatgtagaggtttttagt
gatagaggaaataatgatccggttgcgattgctaaagcaggtgttgcccatgctaaagca
aacggatttaatgtagttattatagatacagcaggtcgtttagcggttgatgaagtcatg
atgaccgagattgctaatatccataaagcggttactcctaatgaaacattatttgttgta
gattctatgacaggtcaagatgccgttaatacagcaaaggcatttaatgatgtgttaaat
tttgatggtgttattcttactaaattagatggtgatactagaggtggagcagcaatttct
attaaatctgttgttaataaaccgataaagtttattggtacaggagaaaaaatggaagca
attgatgttttttatccttctcgtatggcagatcgtatcttgggcatgggagatgttgta
tctcttgtagaacgagctcaagagcaatttgatgaagaagaggccagaaaattacagaaa
aaaattgccaaaaatcaatttggttttgatgacttcttaaaacaaattcagcaggttaag
aagatgggtaatatgaaggatttggttggaatgattcctggagctggtaaaatgatgaag
aatgtcgatatcgatgatgatgcttttaaacacatcgaagcaattattcattctatgacc
cctgcagaacgaacaaaacctcagatcataaatgcaagtagaaaaaaacgcattggtaaa
ggatcgggaacttctgtacagcaggttaatcaattgcttaagcagtttgatcagatgagt
aaaatgatgaaaatgatgcaaggtggaggcggaaagcgaatgatgcagatgatgggtaaa
atgaaataa

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