Aquimarina sp. AD1: D1815_14035
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Entry
D1815_14035 CDS
T05625
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aqa
Aquimarina sp. AD1
Brite
KEGG Orthology (KO) [BR:
aqa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aqa03032
]
D1815_14035 (topA)
03400 DNA repair and recombination proteins [BR:
aqa03400
]
D1815_14035 (topA)
Enzymes [BR:
aqa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
D1815_14035 (topA)
DNA replication proteins [BR:
aqa03032
]
Prokaryotic type
DNA Topoisomerases
D1815_14035 (topA)
DNA repair and recombination proteins [BR:
aqa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
D1815_14035 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
AXT56808
UniProt:
A0A3A9Y3B6
LinkDB
All DBs
Position
complement(3232864..3235362)
Genome browser
AA seq
832 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKFLGKDYKVASSFGHIADLPAKELGVDVEEGFKPKYIVSKDK
KDVVKKLKDLSKKAEMVWLASDEDREGEAIAWHLAEELKLDKERTRRIVFHEITKKAILK
AIENPRSIDYNLVNAQQARRVLDRLVGYELSPVLWRKVKGGLSAGRVQSVSVRLIVERER
DILGFTPIASYRIDAEFSNEKGKSFKAKLPKNFKTKAEAEAFLQKNLGAGFQVADLTTKP
AKKSPAPPFTTSTLQQEASRKLYFSVSKTMTMAQRLYEAGLITYMRTDSVNLSTEAQNSA
KAEIISAYGDEYSNPKQYKGKSKGAQEAHEAIRPTDFARHTVPVDHDQQRLYELIWKRAI
ASQMSDAKLERTNVKIGSTSHNEQFVANGEVIKFEGFLKVYLEGNDDEDEEQSGILPAMK
VGESLFNNYVTATERFTRPPSRYSEAALVKKLEELGIGRPSTYAPTISTIQNRNYIEKGS
KEGEERGYVQITLSGDAIKEKNLKEKVGSDKGKLIPTDVGMVVNDFLVNHFSSILDYNFT
AKVEQDFDEIAEGQEDWTHVMKEFYDEFHPRVEDVAQNAEREVGERILGEDPESGKPVSV
RLGKFGPMVQIGTAEDEDKPRFASLAPGQTLSSVTFEEAMDLFQLPKELGDYKGETVTVN
NGRFGPYVKFGAKFVSLDKGEDPLSTSLERAIELIDAKEKADAPIYTYEDLPVQKGTGRF
GPFIKWKGMFINVNKKYDFDNLSDEDIIQLIEEKKQKEIDKVIHNWEEEGIRVEKARWGR
SNIIKGKTKIELPKTVDATKLTLEKVKDLIEKNAPKKKTAKKKTTKKTTKKK
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggctaagaatttagtgattgtggagtcaccggctaaggcaaagacaatagaaaagttt
ctaggaaaagactataaagtagcttctagtttcggacatattgctgatttgccggcaaaa
gaacttggagtagatgtagaagaaggttttaaacctaagtatattgtctccaaggataag
aaagatgtggttaagaaattaaaagatctttctaagaaggccgagatggtttggttggcg
agtgatgaagatcgagaaggagaagctattgcttggcacttagcagaggagttgaagttg
gataaagagagaacccgtcgtattgtttttcatgagattactaaaaaagctatacttaaa
gcaatagagaatccaaggagtatagattataatctggtaaatgcacagcaagccagaaga
gtactggataggttagtaggatatgagttatctcccgtattatggagaaaagtaaaggga
gggttatctgctggtagagtacaatcggtatcagttcgtttaatcgtagagagagaacgt
gatatacttggttttacacctatagcttcatatcgtattgatgctgagttttctaatgaa
aaaggaaagtcttttaaagcaaaattacctaagaactttaaaacaaaagctgaagctgaa
gcatttttacaaaaaaatcttggagcaggatttcaagtcgcagatcttactacaaaaccg
gcaaaaaaatctccagctcccccatttacaacatctacactacaacaggaggcttcgaga
aaactatatttttctgttagtaagacaatgaccatggcgcaacgtctgtacgaagcagga
ttgattacatatatgagaacggatagtgttaacctgtctaccgaagcccagaatagtgca
aaagcagaaataatttctgcatatggagatgagtatagtaatcctaagcaatataaaggt
aaatcaaaaggtgctcaagaagctcacgaagcgataagacctacagattttgccaggcat
acagttcctgttgatcatgatcaacaacgcttgtatgaattaatttggaaaagagcgatc
gcttcacagatgagtgatgctaaattagaaagaaccaatgttaaaattggatcgacttca
cataatgagcaattcgttgcaaatggagaggtgataaaatttgaaggttttctaaaagtt
tatttagagggcaatgatgatgaagatgaagaacaaagtggaattcttcctgcaatgaag
gtgggagagagtttgtttaataattatgtaaccgctaccgaaaggtttacaagaccgcca
agcaggtattcagaagcagctttggttaagaagttagaagaattaggtattggtcgtcca
tctacatatgcgccaacaatttctactattcaaaatagaaactatatagagaaaggttct
aaagaaggagaagaacgaggatatgtacagattacgctttctggagatgccattaaagaa
aaaaatctaaaggaaaaagttggtagtgataaaggaaaattaattccaactgatgtaggt
atggtagttaatgactttttagtaaatcatttttcctctattttagattataattttact
gcaaaagtagaacaggactttgatgaaattgctgaaggtcaagaggactggacacatgtg
atgaaggagttttatgatgagtttcatcctagagtggaggatgttgctcagaatgcggaa
cgtgaagtaggagaaagaattttgggagaagatccagaatcaggaaaaccagtaagtgtt
cgtttaggtaaatttggccctatggtgcagattggtacggcagaagatgaggataagcct
aggtttgctagtttggctccgggacaaacattaagtagtgttacttttgaagaggcaatg
gatttgtttcaattaccaaaggaacttggagattataagggagaaacagttactgttaat
aatggacgttttggaccttatgtgaaatttggagctaaatttgtttctttagataaagga
gaagatccattaagtacttctctagagagagcaatagagcttattgatgcaaaggagaaa
gcagatgctcctatatatacctatgaagatttaccagtacagaaaggtacaggtagattt
ggtccatttattaaatggaaaggtatgtttattaatgtgaataaaaaatatgactttgat
aatctttctgatgaagatataattcagcttattgaagaaaagaaacaaaaagagatagat
aaagtaattcacaattgggaagaagaaggtatcagggttgagaaagcaagatggggccga
agtaatataataaaaggtaaaactaaaattgaattacctaaaaccgtggatgctactaag
cttactttagagaaagtgaaagatcttattgaaaagaatgctccaaagaaaaagacagca
aagaaaaaaactacaaaaaagactactaaaaagaaataa
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