Aquimarina sp. AD1: D1815_14885
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Entry
D1815_14885 CDS
T05625
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aqa
Aquimarina sp. AD1
Brite
KEGG Orthology (KO) [BR:
aqa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aqa03016
]
D1815_14885 (truB)
Enzymes [BR:
aqa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
D1815_14885 (truB)
Transfer RNA biogenesis [BR:
aqa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
D1815_14885 (truB)
Prokaryotic type
D1815_14885 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
SAM_PNT
Motif
Other DBs
NCBI-ProteinID:
AXT56966
UniProt:
A0A3A9YK42
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All DBs
Position
3446900..3447607
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AA seq
235 aa
AA seq
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MLTEQDYKDGQVLLIDKPLQWTSFQVVNKLRWLIRKNFGIKKIKVGHAGTLDPLASGLLI
ICTGKFTKRIQEFMGQTKEYTGTITLGATTPSYDLETEVDQTFPIDHISEEIIHTTTKQF
IGEIEQYPPVFSALKKDGKRLYEYAREGEEVTIASRKITITEFEITRIELPEVDFKVICG
KGTYIRSLAHDFGKALKSGGHLSVLRRTKIGEFSVHDAISPETFEKQLRTEIETA
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgttaaccgaacaagattataaagacggtcaagtccttttgatcgacaaacctttacaa
tggacatcctttcaggttgttaacaaacttcgttggttaattcgtaaaaattttgggatt
aagaaaataaaggtaggacatgcaggaactttagatcctcttgcttctggattacttatt
atatgtaccggtaaattcacaaaaagaatacaagaatttatggggcaaaccaaggaatat
actggaactattacgctaggagcaaccactccttcttatgatttagaaacagaagttgat
caaacttttcctatagatcatatttcggaggaaataatacacaccaccacaaaacaattt
attggtgaaatcgaacaatatcctcctgttttttctgctttaaaaaaagatggaaaacga
ctctatgaatatgctcgagaaggagaagaagtaacaatcgcatctagaaaaattacaatt
acagaatttgaaattacaagaatagaattacccgaagtagattttaaagtaatttgcgga
aagggaacatacattagatcattagcacacgattttggaaaagcattgaaaagtggtggt
cacctaagtgttttaagaagaactaaaataggtgaattctcggtacatgatgctatcagt
ccagaaacatttgagaaacagctacgtacagaaattgaaaccgcataa
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