Aquimarina sp. AD1: D1815_16765
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Entry
D1815_16765 CDS
T05625
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
aqa
Aquimarina sp. AD1
Brite
KEGG Orthology (KO) [BR:
aqa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
aqa01011
]
D1815_16765
Enzymes [BR:
aqa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
D1815_16765
Peptidoglycan biosynthesis and degradation proteins [BR:
aqa01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
D1815_16765
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM_RLK
LysM2_CERK1_LYK3_4_5
DUF4693
Motif
Other DBs
NCBI-ProteinID:
AXT57314
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All DBs
Position
3899534..3901165
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AA seq
543 aa
AA seq
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MIKNCWFYLSFLFCLVSLQAQDTIPSVSSKAKPSRIVTLDKELTLQKDTVQVVDTTKVIS
AVGELKTTTFTKTSVKDSVMYAIEDHPQLAKLDSIWKQELYNSSLFDTIYKSVTELDYKP
VEYVDLPTDTLKARLARLNARTPFNVEYNTSLESVIKNYLKNRHEHLERLMALSEFYFPL
FEQELDNQNIPLEIKYLAIVESALKPRAKSRVGATGLWQFMFGTGKMFGLEVSSYVDERM
DPIMATQAACKYLASLYRVFGDWDLALASYNSGPGNVTKAIRRSGGYTNYWNIRHNLPRE
TAGYLPAFLATMYIFEYAEEHGFKPRKPEFAYFETDTIKVKQMITLDQVSEVMDINMEEL
QFLNPSYKLDIIPHIKDENYVLRLPLDQVGKFVANENQIYALAQEEFNKREKPLPKLIEA
NDKIRYRVRSGDFLGKIARRYGVRVSQIKRWNGLRSNNLRIGQRLTIYPRRPVVDRPKKK
INTQKAVASTNPSSSETYTVKSGDTLWSISQKFKGVSIENLRSWNNISGTGIKPGMKLKL
SKS
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaaattgttggttttatcttagttttcttttttgtctagtttcgttacaagca
caagatacaatcccatccgtaagctctaaagcgaaaccttcaagaatagtgacacttgat
aaagaattaacattacaaaaagatacagttcaggtagtagataccactaaagttattagt
gcggtcggagagcttaaaacaactacatttactaaaacaagtgttaaagatagtgtgatg
tatgcgattgaggatcatcctcaattggccaagttagattctatttggaaacaagaattg
tataattctagtttgtttgatactatttataaatcagttaccgaattggattataagcct
gtcgaatatgtagatcttccaacagatacattaaaggccagattagcaagattaaatgca
cgtacaccttttaacgttgaatacaatacctcattagaaagtgtgattaaaaattaccta
aaaaatcgccatgagcatcttgagagattgatggcattgagcgagttttattttccatta
tttgaacaagaattagataaccaaaatattccattagaaataaagtatttagccatagta
gaatctgcgctaaaacctagagcgaaatcaagagttggagctacaggattatggcaattt
atgtttggaaccggaaaaatgtttggattagaggtaagttcatatgtagacgaacgaatg
gaccctattatggctacgcaggctgcttgtaaatatttggcaagtctttatcgtgtattt
ggtgattgggatttggcattagcatcttataattcaggaccaggaaatgtaacaaaggcg
atcaggcgaagtgggggatacacaaattactggaatattcgtcataatctgccaagagaa
actgcggggtatttaccagcatttttagctacaatgtatatttttgaatatgcggaagaa
catggttttaaaccaagaaaaccagaatttgcttattttgaaacagatacaattaaagtg
aagcagatgattaccttggatcaggtatccgaggttatggatattaatatggaggagtta
caatttttgaatccttcatataagttagatattattcctcacataaaagatgaaaactat
gttttgcgtttgccgttggatcaagtaggtaaattcgttgctaatgaaaaccaaatatat
gcgctagcacaagaagagtttaataagagagaaaaaccactccctaagcttattgaagct
aatgataaaataagataccgtgtacgtagcggtgattttttggggaaaattgccagaaga
tatggtgtacgcgttagccaaataaaacgatggaatgggttacgtagtaacaatcttaga
ataggacagcgattaactatttatccaagacgccccgtagttgatagaccaaaaaagaaa
ataaatacacaaaaagcagttgcaagtacgaatcctagtagttccgaaacgtatacagta
aaatcgggtgataccttatggagcatttcacaaaaattcaaaggagtttcgatagagaat
ctgcgaagttggaataatatcagcggtaccggaatcaaacctggtatgaagttaaaatta
tcgaaatcttaa
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