KEGG   Aquimarina sp. AD1: D1815_18765
Entry
D1815_18765       CDS       T05625                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
aqa  Aquimarina sp. AD1
Pathway
aqa03030  DNA replication
aqa03430  Mismatch repair
aqa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:aqa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    D1815_18765
   03430 Mismatch repair
    D1815_18765
   03440 Homologous recombination
    D1815_18765
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aqa03032]
    D1815_18765
   03400 DNA repair and recombination proteins [BR:aqa03400]
    D1815_18765
Enzymes [BR:aqa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     D1815_18765
DNA replication proteins [BR:aqa03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     D1815_18765
DNA repair and recombination proteins [BR:aqa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     D1815_18765
SSDB
Motif
Pfam: RNase_T CAF1 DEDDh_C DNA_pol_A_exo1 RNase_H_2
Other DBs
NCBI-ProteinID: AXT57692
LinkDB
Position
4366434..4367096
AA seq 220 aa
MSLWSLNRNKELPDFWNNYLSLFENRFQRKTIDEVRFVAFDTETTGFDYKDDRILSIGCV
AINNVAIDVADQLELYLEQDVFNSDTVEIHGIRKNNNFDTILEYRAIELFIKYIGNAILI
AHHADFDRRMINSALKRHGLGTLKNRFLDTGVLFRKTKHIVYHTHRKHLHYSLDELCDDL
KISKSDRHTASGDAFITAIAFLKTIARLKILKTDKLSNLF
NT seq 663 nt   +upstreamnt  +downstreamnt
atgagtttatggtctctaaatagaaataaagagcttccagatttctggaataattatctt
tcactttttgaaaatcgttttcagagaaaaactattgatgaggttaggtttgttgcattt
gatacagaaactactggctttgattataaggatgataggattctatctattggatgtgtt
gcaattaataatgttgcaattgacgtggcagatcaattggaattatatctagaacaagat
gttttcaattctgatacagtagagattcatgggattcgaaagaataataattttgatacg
atattagaatacagagcaattgagttattcataaaatatataggaaacgctatattaatt
gcacatcatgcagattttgatcgcagaatgataaatagtgccttaaaaaggcatgggtta
gggacattaaagaataggtttttggatactggagtactttttcggaaaactaaacatatc
gtatatcatacccatagaaagcatcttcattatagtttagatgaattatgtgatgactta
aaaatatccaaaagcgatcgacatacagcctctggagatgcttttattactgcaatagct
ttccttaaaaccatagcaagattaaaaattcttaaaacggataagctgtctaatctgttt
taa

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