Aquimarina sp. BL5: D1818_00180
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Entry
D1818_00180 CDS
T05615
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
aqb
Aquimarina sp. BL5
Pathway
aqb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aqb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D1818_00180 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aqb03400
]
D1818_00180 (priA)
Enzymes [BR:
aqb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D1818_00180 (priA)
DNA repair and recombination proteins [BR:
aqb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D1818_00180 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
PriA_C
nSTAND3
AAA_19
ATPase_2
Zn_Ribbon_TF
nSTAND6
WHD_HrcA
AAA_11
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
AXT49311
LinkDB
All DBs
Position
28787..31240
Genome browser
AA seq
817 aa
AA seq
DB search
MTYFIDVILPIPLDKEFTYSINENEAHFLKSGMRVAVQFGKSKVYAALVTKIHQIAPQVY
EAKEIEHILDETPIVTIHQLELWSWISQYYMCSKGEVMRAALPSAFLLESETIILRNDDA
SIDESLLKDDEFLLFEALQHQSLLRIQEVMDIIGKKSVLPLIKRLIEKQVITVQEEIYEQ
YKPKLVRYVKLQSEYTTEEGLQSLLDSLTRAPKQRGILMHLFMLQAKSKNAIKVSELVKA
ANSNSGVIKVLIDKNILEEYHLQTDRVQYEQDSVNATKALNTYQEQALKEVKQTLVEKDV
CLLHGVTSSGKTEVYVKLIEDELQKGKQVLYLLPEIALTTQLITRLREYFGEKLAVYHSK
YSVNERVEAWNNVKGAKSKAQIVIGARSSIFLPFTNLGLIIIDEEHESSFKQYDPAPRYH
ARDTAVVLSNMFKAKVILGSATPALESYYNAKQEKYGLVELTRRYGDVLMPDINLVDLKT
KYKKKEMTGHFSDTLLMAIQEALKEQEQVILFQNRRGYSPVVECNTCGHSPQCPNCDVSL
TYHNYRNQLRCHYCGYHIAMLQKCMACDSHELSTKGFGTEQIENELKELFPDHDIGRMDQ
DTTRGKHGYEKIINKFEEGEIDILVGTQMLTKGLDFRNVTLVGIMNADNLLNFPDFRAHE
RSFQLMQQVAGRAGRTSKRGKVLIQTYNPFHQILQQVSVNDYTAMYKDQIEDRYQYKYPP
FYRIIKITGRHKDYNKVNEATMWLAKSLAITFKENVLGPEFPPISRIRNQYNKNILIKIP
HGQSLKKTKEVIKKVQSSFKSIKEFSGVRIIINVDNY
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgacgtattttatagatgtaatccttcctattcctcttgataaagagtttacgtatagt
attaatgaaaatgaggctcatttcttaaaatcaggaatgcgagttgctgtacaatttggt
aaaagcaaagtgtatgcagcattggttacgaaaatacatcaaatagcgcctcaggtatac
gaagctaaagaaatagagcatattttagatgaaactcctatagttacaatacatcaattg
gaactatggtcttggatctctcaatattatatgtgttcaaaaggagaggtaatgcgagca
gcactcccaagtgcgtttttattagagagcgaaacaattattctaagaaatgacgatgct
tcgattgatgaaagcttattgaaagatgatgagtttctgctgtttgaagcactccagcat
caaagtttactgcgtatacaggaagtaatggatattattggaaagaaaagcgtacttcct
ctgattaaaagattaatagaaaaacaagtaattacggttcaagaagagatttatgaacaa
tataagccaaagcttgtaagatacgttaaactacaatcagaatatacaacagaagaaggt
ctacaatcgttattagactcattgactcgtgctcctaagcaaagaggtatattaatgcat
ttgtttatgctacaggcaaaaagtaagaatgcaatcaaagtcagtgagcttgtaaaagct
gcaaacagcaattcaggagttattaaagtattaatagataaaaatatattagaagagtat
catttacagacagatagagttcaatatgagcaagattcagtcaatgctactaaagcatta
aatacgtaccaagagcaagctttaaaagaggttaaacaaactcttgtggaaaaggatgtt
tgtttacttcatggagtaacttcatcaggaaagacagaagtgtatgtgaaattgatcgaa
gatgaattacaaaaaggaaaacaagttctgtatttgctaccagagattgctttaaccaca
caattaataacaaggttaagagaatattttggagagaaattagcggtctatcattctaaa
tattctgtaaatgagagagtagaagcctggaataatgtaaaaggtgctaagtctaaagct
caaattgttattggagccagatcttcaatttttcttccttttaccaatctaggattaatt
attatagatgaagaacacgagagttcatttaaacaatacgatccagcacctagatatcat
gctagagatacggctgtggttttgtctaatatgtttaaggcgaaagtaatattaggatct
gctacaccagcattagagtcatattataatgcgaagcaggagaaatatgggttggtagaa
ttaaccagacgatatggagatgtgttaatgccagatataaatttggtagatttaaagacc
aaatacaaaaaaaaggaaatgacgggccattttagtgatacactattaatggctattcag
gaggcattaaaagaacaagaacaagttattttgttccaaaatagaagaggatattctcct
gtagtagaatgtaatacttgtgggcactcacctcagtgtcctaattgtgatgttagtctt
acttatcataattaccgtaatcagttgcgctgtcattattgtgggtatcatatagcgatg
ttacagaaatgtatggcgtgcgatagtcatgagttgtctaccaaaggctttggaacggaa
caaatagagaatgaactcaaagagttatttcctgatcacgatattggtagaatggaccag
gatactacgagaggaaaacatgggtatgaaaaaataataaataaatttgaagaaggagaa
atagatattcttgttggaacacagatgttaactaaggggttagattttagaaatgttact
ttggttggaattatgaacgctgataatcttcttaattttccagattttagagcacatgaa
cgtagctttcaattaatgcaacaagtggcaggtagagcagggagaacaagtaaaagagga
aaagtattgattcaaacctataatccatttcatcaaattcttcagcaagtatcagtcaat
gattatactgctatgtataaggatcagatagaggatcgatatcaatataagtatcctcct
ttttatcgcattattaagattacaggtcgtcataaagattataataaagtcaatgaagct
acgatgtggttagcaaaatcattagcgataacttttaaagaaaatgttctagggccagaa
tttccacctatctcgagaataagaaatcagtataataagaatatcttaataaaaataccc
catgggcaatcgctaaagaaaacgaaagaggttatcaaaaaagtacaaagctcttttaaa
agtattaaagaattttctggagtaagaattataattaatgtagataattattaa
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