KEGG   Aquimarina sp. BL5: D1818_00285
Entry
D1818_00285       CDS       T05615                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
aqb  Aquimarina sp. BL5
Brite
KEGG Orthology (KO) [BR:aqb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aqb03032]
    D1818_00285
   03036 Chromosome and associated proteins [BR:aqb03036]
    D1818_00285
   03400 DNA repair and recombination proteins [BR:aqb03400]
    D1818_00285
DNA replication proteins [BR:aqb03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    D1818_00285
Chromosome and associated proteins [BR:aqb03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    D1818_00285
DNA repair and recombination proteins [BR:aqb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      D1818_00285
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-DNA_bdg VWA_2
Other DBs
NCBI-ProteinID: AXT49329
UniProt: A0A3A9VID9
LinkDB
Position
complement(44016..44288)
AA seq 90 aa
MNKTELIDAMAADAGITKAAAKKALESFLGNVEGSLKKGDRVSLVGFGSWSVSKRAAREG
RNPQTGKTIKIAAKNVVKFKAGADLSSSVN
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaacaaaacagaattaatcgatgcaatggcagctgacgctggaattacaaaagcagca
gcaaagaaagctttagaatctttcttaggaaatgttgaaggttctcttaaaaaaggagat
cgtgtttctttagtaggatttggttcttggtcagtttctaaaagagctgcaagagaaggt
agaaaccctcaaacaggtaaaactatcaagattgctgctaaaaacgttgtaaagttcaaa
gctggtgcagatttatctagttcagttaactaa

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