Aquimarina sp. BL5: D1818_05375
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Entry
D1818_05375 CDS
T05615
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aqb
Aquimarina sp. BL5
Pathway
aqb03420
Nucleotide excision repair
aqb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aqb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D1818_05375
03430 Mismatch repair
D1818_05375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aqb03400
]
D1818_05375
Enzymes [BR:
aqb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D1818_05375
DNA repair and recombination proteins [BR:
aqb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D1818_05375
MMR (mismatch excision repair)
Other MMR factors
D1818_05375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
ResIII
AAA_11
ATG17_like
Motif
Other DBs
NCBI-ProteinID:
AXT50287
UniProt:
A0A3A9VBZ5
LinkDB
All DBs
Position
complement(1240675..1243005)
Genome browser
AA seq
776 aa
AA seq
DB search
MEEYLAGLNDAQRAPVLQKDGPMIVIAGAGSGKTRVLTYRIAYLMNQGVDSFNILSLTFT
NKAAREMKKRIADIVGASEAKNLWMGTFHSIFAKILRIEADKLGYPSNFTIYDTQDSQRL
ISSVIKEMGLDKDIYKYKQVQSRISSYKNSLITVKAYFQNAELVEADAMAKRPRMGEIYQ
HYVDRCFKAGAMDFDDLLLKTNELLNRFPDVLAKYQNRFRYILVDEYQDTNHSQYLIVKA
LSDKFQNICVVGDDAQSIYAFRGANINNILNFQRDYDNVQQYRLEQNYRSTKNIVEAANS
IIDKNKTKLDKVVWTANDPGPKIFVNRLLTDGDEGRYVASSIFENQMQHQLTNGQFAILY
RTNAQSRAMEDALRKRDIKYRIYGGLSFYQRKEIKDVLSYLRLIINPKDEEALKRVINYP
ARGIGSTTVDKLVVAANHYDRSIFEIIENLDRINLKINSGTKTRLENFMNMIKSFQVTNQ
TSDAFVLSEMVAKNTGLLQELKKDGTPEGIARIENIEELLNGIRDFVEEQKELADETGSL
AEFLEDVALATDLDQDTGDDDRVALMTIHLAKGLEFPYVYIVGMEEDLFPSGMSMNTRSE
LEEERRLFYVALTRAEKQAYLTYTQSRYRWGKLVDAEPSRFIEEIDAQYLEYITPIDTYR
YKPLVDTDIFGDVDKSKLRLKKPISGSPPVSHKPSEEQLRKLRKLRPISNDATSTPKTNL
FDGDLVPGTIVEHMRFGKGKILQLDGVGQDKKAEINFENGGIKKLLLRFAKLKVIG
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
ttggaagaatatttagctggattaaatgatgcgcaacgagctcctgtactgcagaaagat
ggtcctatgatcgtgattgcaggtgctggttcaggaaaaacgagagtgcttacttatagg
attgcctatcttatgaatcaaggagtggattcatttaatatcttatcattaacatttacc
aataaggctgcgcgagaaatgaaaaagcgtattgctgatattgtaggtgctagcgaagca
aagaatctatggatgggaacgttccattcgatttttgctaaaatcctaagaattgaagct
gataaattaggatatccttctaattttacgatatatgacacgcaagattctcagcgatta
atttcatcggtaattaaagagatgggattggacaaagatatttataagtataaacaggtt
caatcacgaatttcatcttacaagaacagtttgattaccgtaaaagcatattttcaaaat
gccgaattagtagaggccgatgccatggcaaaaaggccgcgtatgggagaaatttatcaa
cattatgtagatcgctgctttaaggctggagctatggattttgatgatttattacttaaa
actaatgaattgttgaatcgttttccggatgtattggctaaatatcaaaatcgctttaga
tatattctggtggatgagtaccaggataccaatcactcacagtacctgatcgtaaaggca
ttatcagataaatttcagaatatctgtgtggtaggagatgatgcgcaaagtatttatgcc
ttccgtggagcaaatattaataacatccttaattttcagagggattatgataatgtacaa
caatatcgattggaacaaaattatcgatctaccaaaaatattgtagaagctgctaactct
attatagataagaataaaacaaagcttgataaggtagtttggactgctaatgatcccggt
cctaaaatttttgtaaatcgattattaacagatggtgatgaaggacgatatgtagcgagt
tctatcttcgagaatcaaatgcaacatcagttgaccaatggtcagtttgctattttatac
agaacaaacgcacagtctcgtgcgatggaagatgcccttcgtaaaagagatattaaatat
aggatctatggtgggttatctttttatcaacgaaaagaaatcaaagatgttttaagttac
ttaagactaatcatcaacccaaaagatgaagaagcactaaagcgagttattaattatcca
gctcgaggaattggtagtactactgtagataaattagtggtagcagcgaatcattatgat
cgttctattttcgaaattattgaaaatctagatcgaattaatctgaaaattaatagcggg
acaaaaaccaggttagaaaatttcatgaatatgatcaagagttttcaggttaccaatcaa
acttctgacgccttcgtgttatcagaaatggtagctaaaaacactggtctgcttcaagag
cttaagaaagatggaacacctgaaggaattgcacgtattgaaaacatagaggagttactg
aatggtattcgagactttgtagaggaacaaaaagagttggcagatgaaactgggtcgctt
gctgaatttttagaagatgtggcactagcaacagatctagatcaggatactggtgatgat
gatagggtagctttaatgacaatacatttggcaaaaggattagaatttccttacgtctat
attgtaggtatggaggaagatttgtttccatccggaatgagtatgaataccaggtcagag
ctggaagaggagcgaagattattttatgtagctttaaccagagcagagaaacaagcatat
ttaacgtatacgcaatcacgatatcgttggggtaagcttgtagatgcagagcctagccgt
tttatagaagaaatagatgctcaatatctagaatacataacaccaattgatacctaccgc
tataaaccattggtagatactgatatttttggagatgttgataaaagtaaactaagactt
aaaaaaccaatatcaggatcacctccagtttctcataaaccatcagaggaacaattgcgt
aagctacgtaaattaagaccgatttctaatgatgctacaagtactcctaaaacgaatctt
tttgatggagatttggtacctggaaccattgtagagcatatgcgttttggtaaaggaaaa
attctacaattagatggggtaggtcaagataaaaaagcagagattaattttgaaaacggt
ggaattaaaaagctattactaagatttgctaagctgaaagtgatcggttaa
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