Aquimarina sp. BL5: D1818_15950
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Entry
D1818_15950 CDS
T05615
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
aqb
Aquimarina sp. BL5
Brite
KEGG Orthology (KO) [BR:
aqb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aqb03032
]
D1818_15950
03036 Chromosome and associated proteins [BR:
aqb03036
]
D1818_15950
03400 DNA repair and recombination proteins [BR:
aqb03400
]
D1818_15950
DNA replication proteins [BR:
aqb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
D1818_15950
Chromosome and associated proteins [BR:
aqb03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
D1818_15950
DNA repair and recombination proteins [BR:
aqb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
D1818_15950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
PqqD
Motif
Other DBs
NCBI-ProteinID:
AXT52259
UniProt:
A0A3A9W9F8
LinkDB
All DBs
Position
complement(3831625..3831915)
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AA seq
96 aa
AA seq
DB search
MTKADIVAKISEKLGIEKGDVQATVETFMEEVKSSLESGDNVYLRGFGSFIIKTRAEKTG
RNISKNTTIKIPAHNIPAFKPAKVFVEGVKTNVEVK
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagcagatattgtagcaaaaatttcagaaaaactaggaattgaaaaaggagat
gttcaggcaactgttgaaacctttatggaagaagtaaaaagttctttagagagcggagat
aatgtatacctaagaggttttggtagctttatcatcaagacaagagctgaaaaaactggt
cgtaacatttctaaaaacactacaatcaaaatacctgcacataatattcctgcttttaag
ccggcgaaagtatttgtggaaggtgtaaaaactaacgtagaagttaagtaa
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