Aquimarina sp. BL5: D1818_16165
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Entry
D1818_16165 CDS
T05615
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aqb
Aquimarina sp. BL5
Brite
KEGG Orthology (KO) [BR:
aqb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aqb03016
]
D1818_16165 (truB)
Enzymes [BR:
aqb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
D1818_16165 (truB)
Transfer RNA biogenesis [BR:
aqb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
D1818_16165 (truB)
Prokaryotic type
D1818_16165 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
SAM_PNT
Coilin_N
Motif
Other DBs
NCBI-ProteinID:
AXT52300
LinkDB
All DBs
Position
complement(3870645..3871352)
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AA seq
235 aa
AA seq
DB search
MLTEQDYKDGQILLIDKPLQWTSFQVVNKLRWLIRKNFGIKKIKVGHAGTLDPLASGLLI
ICTGKFTKRIQEFMGQTKEYTGTITLGATTPSYDLETEIDKTFAIDHISEEVIKTTTEQF
IGEIEQYPPIFSALKKDGKRLYEYARQGEEVEIPARKITISAFEITRIELPEIDFRVVCG
KGTYIRSLAHDFGKALQSGGHLSVLRRTKIGEFSVDDAISPQVFENQLHSEIETT
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgctaaccgaacaagattataaagatggtcaaattcttttgatcgataagcctctacaa
tggacatcctttcaggttgttaacaaactgcgttggttaattcgtaaaaattttgggatc
aaaaaaatcaaagtaggacacgcaggaacattagaccctcttgcttcgggattacttatc
atctgtaccggtaaattcacaaaacgaatccaagaatttatgggacaaactaaagaatat
acaggaaccattacattaggagcaactactccttcttatgatttagaaacggaaatcgat
aaaacttttgctatcgatcacatttctgaagaagttataaaaacaaccaccgaacaattt
attggtgaaatcgaacaataccctccgattttttcagctttaaaaaaagatggaaaacga
ttatacgaatacgctcgtcagggtgaggaagttgaaataccagcaagaaaaattactatt
tcagcgtttgaaattaccagaatcgaattacctgagattgattttagagtagtttgcgga
aaaggaacttatattagatcattggcgcacgattttggaaaagcactacaaagtggaggt
catttaagtgttttaagaagaaccaaaataggagaattctctgtggatgatgcaataagc
ccgcaagtgtttgaaaatcagttgcactcggaaattgaaactacataa
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