Aquimarina sp. BL5: D1818_19290
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Entry
D1818_19290 CDS
T05615
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
aqb
Aquimarina sp. BL5
Pathway
aqb03030
DNA replication
aqb03430
Mismatch repair
aqb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aqb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D1818_19290
03430 Mismatch repair
D1818_19290
03440 Homologous recombination
D1818_19290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aqb03032
]
D1818_19290
03400 DNA repair and recombination proteins [BR:
aqb03400
]
D1818_19290
Enzymes [BR:
aqb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D1818_19290
DNA replication proteins [BR:
aqb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D1818_19290
DNA repair and recombination proteins [BR:
aqb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D1818_19290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
GIY_YIG_2
DUF7508
Motif
Other DBs
NCBI-ProteinID:
AXT52863
LinkDB
All DBs
Position
4644416..4645795
Genome browser
AA seq
459 aa
AA seq
DB search
MSEKLYAVIDVETTGKGIKGNRITEICIVLLQGSTVIDKFTSLVNPECHIPPFITGLTGI
DNDMVRNAPRFHEIAERVVQMTTGAIFVAHNVTFDYNVVRGEFKNLGYSFVRKKLCTVRL
SRKLIPGMFSYSLGKLCSSLNIPLEDRHRAEGDTDATVILFQRILSLDPEFLVINKFLNA
RSKEATLPPHLKAENIDTLPEETGIYLFKDQKGKVIYAGKAKNIKQRVISHFYDKKNKEY
ALGQATYTIDYEVTGNELVALLLESEKIQKHYPKFNKAQKRPVAPYCIMFYTNRKGVVQL
AIDRSHSIDHSVEIFYSRAEAVEKLEQLCEDHQLCPRYCSLQSTTEKCSHYKIKNCKGIC
IGEESVALYNMRVQKALSSLRRDQKSYFIKEKGRTFNEQSFVMIQDGVYKGFGYIQEDEQ
ITKIEDFDNFLNLQKHTYHTTKIIKSYLRKNGDRNIVAI
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaaattatatgctgttattgatgtagaaaccaccggtaaaggcattaaaggg
aatcgcattacggaaatttgtattgtattgttacaaggcagtacggttatagataaattc
acttctctggtaaatcccgaatgtcatattccaccttttattacgggtcttacagggatt
gataatgatatggtacgaaatgcacctaggtttcacgaaatagcagaacgtgttgtacag
atgactacaggagccatctttgtggcgcataatgtaacttttgattataatgtggttaga
ggagagtttaaaaacctcgggtattcatttgttcgaaagaaactttgtaccgttcgctta
tccagaaaattaataccgggtatgttttcatatagcttaggaaaattatgctcttctctt
aatattcctttagaagatcgacatagagcagaaggcgatacggatgcgactgtgattctt
tttcaacgaattctaagtcttgatcctgagtttttggtcattaataaattcttaaatgca
cgctctaaggaagctacattaccaccacatcttaaagctgaaaatatagatacactccca
gaagaaactggtatttacttatttaaagatcaaaagggaaaagtaatatatgccggtaaa
gcgaaaaacattaaacagcgggtgattagtcatttttatgataaaaagaataaagaatat
gcactgggtcaggctacatatacgatagattatgaggtaacgggtaatgaattagttgct
ctattactagaatcagaaaaaatccaaaaacattatccgaagtttaacaaagctcagaaa
agaccagtagctccttattgtattatgttttacacgaatagaaaaggagtggtccaattg
gcaattgatagatcgcattctatagatcattcggtagaaatattttatagcagggcagaa
gcagtagaaaaacttgaacaactttgtgaagatcatcaattatgcccacgatattgtagt
ttacagagtacgacagaaaaatgttctcattataagattaagaattgcaaaggtatttgc
ataggagaagaatctgttgccttgtataatatgagagtccaaaaagctttatcttcttta
cgaagagatcaaaagagttattttatcaaagaaaaaggtagaacatttaatgagcaaagc
ttcgtaatgatccaagatggtgtttataaaggttttggatatatacaggaagatgaacaa
attactaagatagaagacttcgataatttcttgaatcttcagaaacacacctatcacact
accaaaataatcaaaagctatctacgtaaaaatggagataggaatatcgttgcaatataa
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