Aquimarina sp. BL5: D1818_20360
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Entry
D1818_20360 CDS
T05615
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aqb
Aquimarina sp. BL5
Brite
KEGG Orthology (KO) [BR:
aqb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aqb03032
]
D1818_20360
03400 DNA repair and recombination proteins [BR:
aqb03400
]
D1818_20360
Enzymes [BR:
aqb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
D1818_20360
DNA replication proteins [BR:
aqb03032
]
Prokaryotic type
DNA Topoisomerases
D1818_20360
DNA repair and recombination proteins [BR:
aqb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
D1818_20360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
CaMKII_AD
Motif
Other DBs
NCBI-ProteinID:
AXT53063
UniProt:
A0A3A9VAV2
LinkDB
All DBs
Position
complement(4868088..4869188)
Genome browser
AA seq
366 aa
AA seq
DB search
MNTDFTDATFLTQIIKEPELVIDQLNLVYVKDDALIITRVKHKKGFRYLQNGIPLSTKKE
LERIKKIVIPPAWNHVRISSIDNGHLQAIGRDLKNRKQYRYHPLWNTIRNQTKFYKMAVF
GRQLPKIRKQVDQDLEQKKWSKTKVLALIIRLMEETHIRIGNEQYAKRNKTYGLSTMRTR
HVNIEKNKLKFEFVGKKGKKHSVTLRNKKLIRLVNRCEEIPGWELFQYYDMQGEKHSIES
NMINEYLHEIGGELFTAKDFRTWGATTIFFETLMDLGVSKKEKETQKNILKAYDMAATSL
GNTRNVCRKYYVHPFVESSYKNGSIKKVFNKIDTSNQSADYFTNTEHAILNLLTDYTPTF
LKNVKH
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaatacagattttacagatgcaacatttttaactcagatcatcaaagaacccgaatta
gtaattgatcaactaaatctagtatatgtaaaagacgatgcactaataataactagagta
aaacacaagaaaggttttcgatatcttcagaatggtataccactgtcaactaaaaaagag
ttggaaagaataaaaaaaatagtaattcctcctgcctggaatcacgtcagaatttcttct
atagacaatggacatctacaagccattggtagagatctaaaaaaccgaaaacaatataga
tatcatccactctggaatactatacgcaaccaaacaaaattttacaaaatggctgttttt
ggtagacaacttcctaaaataagaaaacaggtagatcaagatttagaacaaaaaaaatgg
tccaaaactaaagtactagcactcatcataaggctaatggaagaaactcatattcgtatc
ggcaatgagcagtatgctaaacgcaataaaacctatggtttatctacaatgagaactcga
catgtaaatatagaaaagaacaaacttaaatttgagtttgtaggtaaaaaagggaaaaaa
cattctgtaacgcttcgaaacaaaaaactcatacgcctagtcaatcgctgtgaagaaata
ccaggttgggagctattccaatattatgatatgcaaggagaaaaacacagtattgaaagc
aacatgattaatgaatatcttcatgaaattggaggtgaactttttacggcaaaagatttc
agaacctggggtgctactacaattttttttgaaactttaatggatttgggagttagtaag
aaagaaaaagaaactcaaaagaatattctaaaagcatacgatatggctgcaactagttta
ggaaatacgagaaatgtatgtcgtaaatactatgtacatccctttgtagaatcatcatat
aaaaatggttctataaaaaaggtatttaacaaaattgatacttctaatcaatcagcagat
tattttaccaatacagaacacgccattttaaatttattgacggactatacacctacattt
ttaaaaaatgttaaacactaa
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