Aquimarina sp. BL5: D1818_21840
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Entry
D1818_21840 CDS
T05615
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
aqb
Aquimarina sp. BL5
Brite
KEGG Orthology (KO) [BR:
aqb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aqb03009
]
D1818_21840 (rimO)
Enzymes [BR:
aqb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
D1818_21840 (rimO)
Ribosome biogenesis [BR:
aqb03009
]
Prokaryotic type
ribosomal protein modification factors
D1818_21840 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AXT53339
UniProt:
A0A3A9VZS7
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All DBs
Position
5194866..5196167
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AA seq
433 aa
AA seq
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MRTKTLKKNKINVVTLGCSKNVYDSEVLMGQLKANNKEVVHEEEGNVVVINTCGFIANAK
EESVNTILEYVQKKDQGIVDKVFVTGCLSERYKPDLQKEIPDVDQYFGTTELPGLLKALG
ADYKHELIGERLTTTPKNYAYLKIAEGCDRPCSFCAIPLMRGKHKSTPIEELVTEAEKLA
ANGVKELVLIAQDLTYYGLDLYKERKLADLLRELVKVEGIEWIRLHYAFPTGFPMEVLDV
MKQEPKICNYIDIPLQHIADPILKSMRRGTTKAKTTKLLNEFRAAVPEMTIRTTLIVGYP
GETQEDFETLRDWVKEMRFERLGCFTYSHEENTHAYNLENDVPEDVKMDRANEIMEIQSQ
ISWELNQQKIGQEFKVVIDRKEGPYFVGRTEFDSPDVDNEVLIDASKFYLKTGEYTTVKI
YEAEDFDLYGELV
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagaacaaagactttaaagaaaaataagatcaatgtagttacattaggttgtagtaag
aatgtgtatgacagtgaggttcttatgggacaactgaaagctaacaacaaagaagtagtt
cacgaagaagaagggaatgtcgtggttattaatacttgtggttttattgcaaatgcaaaa
gaagagtctgtaaatactattttagaatatgtacagaaaaaagatcaaggtattgtagat
aaagtttttgttactggatgtttgtcagaaagatataagccggatttgcagaaagaaatt
ccggatgtagatcaatattttggtactacagagttaccaggcttattgaaagcgttggga
gcagattataaacatgaactaataggagagagattaacaacaactcctaagaattatgca
tatctaaaaatagcagaaggttgtgatcgcccatgttctttttgtgcaattccattgatg
cgtggtaagcataaatcaacaccaattgaagaattagttaccgaagcagaaaagttagct
gccaatggagtgaaagaattagtgctaattgctcaggatttaacctattatggacttgat
ctttataaagaaagaaagttagcggatttacttcgtgaattggtaaaagtcgaaggaata
gagtggatacgtttacattatgcatttccaacaggatttccgatggaagtattagacgta
atgaaacaagaacctaaaatatgtaattatattgatatcccattacagcatatagcagat
ccgattctgaagtcaatgcgtcgcggtactacgaaagcaaaaactactaagctgcttaat
gagtttagagcggcagtgccagaaatgacaattcgaactacattaattgttgggtatcca
ggagaaacacaagaagattttgaaacactaagagattgggtaaaggagatgcgttttgaa
cgtcttggatgttttacatattctcacgaagaaaacacacatgcttataacctagaaaat
gatgttccggaagatgtgaaaatggatcgtgccaacgaaatcatggaaatacaatcacaa
atctcttgggagctgaatcaacagaaaataggacaagaatttaaggttgttattgataga
aaagaagggccttattttgtaggtagaacagagtttgactctcctgatgtagataacgag
gtgttaattgatgcatctaagttttatttaaaaactggagaatataccaccgttaaaata
tacgaagcagaggattttgatttgtatggagaattagtttaa
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