Aquimarina sp. AD10: D1816_02785
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Entry
D1816_02785 CDS
T05712
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aqd
Aquimarina sp. AD10
Pathway
aqd03420
Nucleotide excision repair
aqd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aqd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D1816_02785
03430 Mismatch repair
D1816_02785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aqd03400
]
D1816_02785
Enzymes [BR:
aqd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D1816_02785
DNA repair and recombination proteins [BR:
aqd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D1816_02785
MMR (mismatch excision repair)
Other MMR factors
D1816_02785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
AXT59315
LinkDB
All DBs
Position
672853..675186
Genome browser
AA seq
777 aa
AA seq
DB search
MEEYLAELNDAQRAPVLQKDGPMIVIAGAGSGKTRVLTYRIAYLMHQGVDSFNILSLTFT
NKAAREMKKRISTIVGASEAKNLWMGTFHSIFAKILRFEADKLGYPSNFTIYDTQDSQRL
VASVIKEMGLDKDIYKYKQVYSRISSYKNSLITVKAYFQNGELVEADAMAKRPRMGEIYQ
HYVDRCFKAGAMDFDDLLLKTNELLNRFPEVLSKYQNRFRYILVDEYQDTNHSQYLIVRA
LSDKFQNICVVGDDAQSIYAFRGANINNILNFQRDYDNVQQYRLEQNYRSTKNIVEAANS
IIDKNKTKLDKVVWTANDPGPKIIVNRLLTDADEGRYVASSIFENQMNHQLDNGNFAILY
RTNAQSRSIEDALRKRDIKYRIYGGLSFYQRKEIKDVLGYLRLIINPKDEEALKRVINYP
ARGIGGTTVDKLIVAANHYDRSIFEVIENLDRINLKINSGTKTRLENFMNMIKSFQVTNK
TSDAFVLSEIVAKKTGLLQELKKDGTPEGIARIENIEELLNGIRDFVEGQKEVVDSKGSL
AEFLEDVALATDLDQDTGDDDRVALMTIHLAKGLEFPYVYIVGMEEDLFPSGMSMNTRSE
LEEERRLFYVALTRAEKQAYLTYTQSRYRWGKLVDAEPSRFIEEIDDKFLEYLTPVEGYR
YKPLIDADIFGEVDKSKLRLKKPVSGAPPLAHKPNEEQLRKLRKLRPVSNGSTNTDNNTN
LFDQELIPGSVVEHMRFGIGKIIKIEGVGQDKKAEINFEKGGIKKLLLRFAKLKVIG
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
ttggaagaatatttagcagagttgaatgatgcacaaagagcccctgtacttcagaaagat
gggcctatgattgttattgccggtgcagggtcaggaaaaacgcgtgtattaacttatcga
attgcttatttgatgcatcagggagtagattcatttaatattttatcgttgacttttacc
aataaggcagcgcgtgaaatgaaaaaacgtatttctactatagtaggagctagtgaagcc
aaaaatctatggatgggaacatttcattcgatatttgctaaaattttaaggtttgaagca
gataaattaggatacccttctaattttaccatctatgatactcaagattctcaacgttta
gttgcctctgtgattaaagagatggggcttgacaaagatatttataaatacaaacaggtt
tattcaaggatttcatcgtataaaaacagtttgattaccgtaaaagcttattttcaaaat
ggcgaattggtagaagcagatgcaatggcaaagcgccctagaatgggtgaaatttatcag
cattatgtagatcgttgttttaaagccggagctatggattttgatgatttattgcttaaa
actaatgaattattaaacaggtttcctgaagtattatctaaatatcaaaatcgatttaga
tatatattagtagatgagtaccaagatacaaatcactctcaatatcttattgttagagct
ttgtcagataaatttcagaatatctgtgtagtaggtgatgatgcacagagtatttatgct
tttagaggtgctaacatcaacaatatccttaattttcaaagggattatgataatgtgcag
caataccgtttagagcaaaattatagatctacaaaaaatatcgtagaggctgcaaactca
attattgataagaataaaaccaaattagataaagtagtatggaccgcaaatgatcctggc
cctaaaattatagtaaataggttattaaccgatgccgatgagggtagatatgtcgcaagt
tctatatttgaaaatcaaatgaaccatcaattagataatggtaattttgcaatactgtat
cgaacaaatgcgcaatcacgatctatagaggatgcattacgtaaaagagatataaaatat
aggatttatggtggactctcgttttatcaacgtaaagaaataaaagatgttcttggctat
ttgcgattgatcattaatcctaaagatgaggaagcattaaaaagagtaattaattatccc
gctagaggtattggtggtaccacggtagataaacttattgtggctgctaatcattatgat
cggtcaatatttgaggtaattgaaaatttagatcgtattaatcttaaaattaatagtggt
actaagaccagactagaaaattttatgaatatgatcaagagttttcaagtcactaataaa
acttcagatgcttttgttttgtctgaaatagttgcaaagaaaacaggattattacaagag
ttaaagaaagatggtactccagaaggtattgctagaattgaaaatattgaagaattatta
aacggtattcgtgattttgtagaagggcagaaagaagtagtagattcaaaaggatcatta
gcagagtttcttgaagatgtagcactagcaacagatttggatcaagatactggtgatgat
gatagggttgcactaatgactattcatttagcaaaaggactagagtttccatatgtatac
attgtgggtatggaagaagacctttttccttcgggaatgagtatgaatacaagaagtgag
ttagaagaagaaagacgtttgttttatgtggcattgaccagggctgaaaaacaagcttac
ttgacatatacacaatctcgatatcgatggggaaaactcgttgatgcagaaccaagtagg
tttatagaagaaatcgatgataaatttcttgaatacctaacacctgtagaaggctacaga
tataagcctttaatagatgctgatatatttggagaagtagataaaagtaaattgcgactc
aaaaaaccggtgtctggtgcgccaccattagcacataaaccaaacgaagaacagctacga
aagttgagaaaattgcgtcccgtttctaacggttcaacaaatacagataataacactaat
ttatttgatcaagaattaattcctggtagtgttgtagagcatatgcgtttcggaattgga
aaaattattaaaattgaaggagtagggcaagacaaaaaagcagagattaattttgaaaaa
ggagggattaaaaaattgttgcttcgttttgcaaaattaaaagtaataggttag
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