Aquimarina sp. AD10: D1816_06420
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Entry
D1816_06420 CDS
T05712
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
aqd
Aquimarina sp. AD10
Brite
KEGG Orthology (KO) [BR:
aqd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aqd03032
]
D1816_06420
03036 Chromosome and associated proteins [BR:
aqd03036
]
D1816_06420
03400 DNA repair and recombination proteins [BR:
aqd03400
]
D1816_06420
DNA replication proteins [BR:
aqd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
D1816_06420
Chromosome and associated proteins [BR:
aqd03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
D1816_06420
DNA repair and recombination proteins [BR:
aqd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
D1816_06420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
VWA_2
Motif
Other DBs
NCBI-ProteinID:
AXT60003
UniProt:
A0A3A9VKW8
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All DBs
Position
1505971..1506243
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AA seq
90 aa
AA seq
DB search
MNKTELIDAMAADAGITKAAAKKALESFLGNVEGSLKKGDRVSLVGFGSWSVSKRAAREG
RNPQTGKTIKIAAKNVVKFKAGADLSSSVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaacagaattaatcgatgcaatggcagctgatgctggaatcacaaaagcagcg
gctaaaaaagccttagaatcttttttaggaaacgttgaaggtagccttaaaaaaggtgat
cgtgtttctttagtaggattcggatcttggtcagtttctaaaagagctgcaagagaaggt
agaaacccacaaacaggtaaaactatcaaaattgctgctaaaaacgttgttaagtttaaa
gctggtgctgatttatctagttcagtaaattaa
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