Aquimarina sp. AD10: D1816_09860
Help
Entry
D1816_09860 CDS
T05712
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aqd
Aquimarina sp. AD10
Pathway
aqd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aqd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D1816_09860 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aqd03019
]
D1816_09860 (recQ)
03400 DNA repair and recombination proteins [BR:
aqd03400
]
D1816_09860 (recQ)
Enzymes [BR:
aqd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D1816_09860 (recQ)
Messenger RNA biogenesis [BR:
aqd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D1816_09860 (recQ)
DNA repair and recombination proteins [BR:
aqd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D1816_09860 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
HTH_40
VASP_tetra
HHH
Motif
Other DBs
NCBI-ProteinID:
AXT60645
UniProt:
A0A3A9W793
LinkDB
All DBs
Position
complement(2393020..2395224)
Genome browser
AA seq
734 aa
AA seq
DB search
MSLNGTDLQSALKRHFGFSQFRGLQEKVIQSILEKKNTFVIMPTGGGKSLCYQLPALMCE
GTAIVVSPLIALMKNQVDAIRSISSEEGIAHVLNSSLNKSEVKKVKDDIINGVTKLLYVA
PESLTKEEYVDFLKSQKISFLAVDEAHCISEWGHDFRPEYRNLRNIIKRIGENIPIIGLT
ATATPKVQEDILKNLAMSDANTFKASFNRPNLYYEIRPKTKNVDADIIRFVKQNSGKSGI
VYCLSRKRVEELAQTLEVNGVKAVPYHAGLDAKTRAKHQDMFLMEDTDVVVATIAFGMGI
DKPDVRFVIHHDMPKSIESYYQETGRAGRDGGEGHCLAYYAYKDIEKLEKFMSGKPVAEQ
EIGHALLQEIVAFAETSISRRKFILHYFGEEFDEVNGEGADMDDNVRTPKKKHEAKDEVQ
LLIEVVSKTGEIYKSKDLVSTLIGKSNALIISHKTHQQSFFGSGKTKDGKYWMALIRQVL
VAGYLRKDIETYGVIRVTSEGKEYLGNPVSFMMTEDHVYNQANDDAIITAAKSGAKGGSD
DKLAGMLRDLRKKVAKKLGVPPFVVFQDPSIDDMALKYPISIEEMANVHGVGEGKAKKYG
KEFVALIARYVQENDIMRPDDFVVKTTGANSGLKLYIIQNVDRKLRLDDIAAAKGMDMTA
FIKEMEAIVYSGTKLNIAYWIDEILDEDQQEEIHEYFLEAENDKIDTAIEEFDGDYDDEE
LRLYRIKFISEVAN
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgaatggaactgacttgcaaagtgcactaaagaggcattttggatttagtcaa
tttagaggactacaggaaaaggtaatacaaagtattctcgaaaagaaaaatacatttgtt
ataatgcctacaggcggaggaaaatccctatgttatcaactgcctgctttaatgtgcgaa
ggaactgctattgtagtttctcctttgatcgctttgatgaaaaatcaagttgatgcaatt
cgcagtatttcttctgaagaaggaatagcgcatgtgttaaattcatctttgaataaatct
gaagtaaaaaaggttaaagatgatattattaatggtgttacaaaattattatatgtagct
ccagaatcacttactaaagaagaatatgtagattttttgaaatctcagaaaatttcattc
ttagctgtagatgaagcacattgtattagtgaatggggacatgattttagaccagagtat
cgaaatcttcgcaatattattaagcgaattggtgaaaatatcccaatcattggtcttacg
gctaccgcaactccaaaagtacaagaagatattttgaaaaatttagcaatgagtgatgct
aatacatttaaggcatcatttaatcgacctaatttgtattatgaaataagacctaaaact
aaaaatgttgatgcggatataattcgttttgtaaaacaaaacagcggtaaaagtggtatc
gtatattgtttaagcaggaaaagagttgaagaacttgcacaaacattagaagttaatggt
gttaaagcagttccttatcatgcaggtttagatgctaaaaccagagctaaacatcaagat
atgtttttgatggaagatacagatgtagtggtggctacaattgcctttggaatgggaatt
gataaacccgatgtacgttttgtgattcatcatgacatgccaaaaagtattgaaagttat
tatcaagaaacaggtcgtgctggtagagatggaggagaagggcattgtctggcttattat
gcctataaggatatagagaagctcgagaaattcatgagtggtaaacctgttgctgagcag
gaaataggacatgcactattacaagaaattgttgcttttgcagaaacctctatttcaaga
cgtaaatttatattgcattattttggagaagaatttgatgaggtaaacggtgaaggagcc
gatatggacgataatgttcgaacgcctaagaaaaaacatgaagccaaagatgaggtacaa
ttacttattgaagtagttagtaaaacaggcgaaatatacaaatccaaagatttagtaagt
acactaataggtaaaagtaatgcacttattatttctcataaaacgcatcaacaatctttt
tttggtagtggtaaaacaaaagatggtaagtattggatggctttaatacgtcaagtgctt
gttgcaggttatttaagaaaagatatagagacgtatggtgtgattagagtaacttcagaa
ggaaaagagtacttaggtaatccagttagtttcatgatgaccgaagatcacgtttataac
caagcaaatgatgatgccattattacagcagcaaaatctggtgcaaaaggaggtagtgat
gataagttggctgggatgttacgggatttaagaaaaaaagtagctaaaaaacttggagtt
ccaccttttgtggtctttcaagatccttctatagatgatatggctttaaaatatcctatt
tcaatagaggaaatggccaatgttcatggagtaggagaaggtaaagctaagaaatatgga
aaagaatttgtagctcttatagcaagatacgttcaagaaaatgatataatgcgccctgat
gattttgtagttaagactacaggagccaatagtgggttaaagctgtatattatacaaaat
gtggatcgtaaattaagattagatgatatagcggctgccaaaggaatggatatgacagct
tttataaaagagatggaagctattgtttatagtggcactaagctcaatatagcatattgg
attgatgagatacttgatgaagatcaacaagaagaaatacatgagtatttccttgaagca
gaaaatgataagatagatactgccatagaagaatttgacggagattatgatgatgaggaa
cttcgtttgtaccgtataaaatttatcagtgaagtagcaaactag
DBGET
integrated database retrieval system
