Aquimarina sp. AD10: D1816_12275
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Entry
D1816_12275 CDS
T05712
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
aqd
Aquimarina sp. AD10
Pathway
aqd03030
DNA replication
aqd03430
Mismatch repair
aqd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aqd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D1816_12275
03430 Mismatch repair
D1816_12275
03440 Homologous recombination
D1816_12275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aqd03032
]
D1816_12275
03400 DNA repair and recombination proteins [BR:
aqd03400
]
D1816_12275
Enzymes [BR:
aqd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D1816_12275
DNA replication proteins [BR:
aqd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D1816_12275
DNA repair and recombination proteins [BR:
aqd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D1816_12275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DUF7508
DUF2326
Motif
Other DBs
NCBI-ProteinID:
AXT61091
LinkDB
All DBs
Position
2940796..2942175
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AA seq
459 aa
AA seq
DB search
MRDQLYSVIDVETTGKGILGNRITEICIVVLKDSTIIDKFTTLVNPEQHIPPFITGLTGI
DDDMVRNAPKFHEVANRILEMTTGAIFVAHNVNFDYNVVREEFKNLGHTFTRKKLCTVRL
SRKLIPGLFSYSLGRLCTSLNIPLEGRHRAEGDTDATVILFQQILTLDPEHLTINTFLNA
RSKEATLPPHLNVETIDSLPEETGIYLFKDQKGNVIYAGKAKNIKQRVISHFYDKKNKEY
ALGQSTYTIDYEITGNELIALLLEAEKIQKYYPKFNSAQKKPVVPFRILKYTNRKGIIQL
AIDRSKSIDHSLEIFYRRSDAIEQLEKLCFDYQLCPKYCNLLNTTERCSHYRIKNCKGIC
CEEESVALYNMRVQKALTSLTKEKETYFIKEKGRTMNEHSFIMIQDGIYKGFGYIDHSEQ
LSTLEDFDSFLTSQKHTYHTTKIIKSYLRKHGENNIVYF
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcgagatcaattatattcggttatcgatgttgaaactactggaaaaggtattttagga
aatcgcattacagagatttgtattgtggtcttaaaagatagtacgatcattgataagttt
actactcttgtaaatcctgaacaacacatccctccttttattactggtcttaccggcata
gatgacgatatggtgagaaatgcaccaaagtttcatgaagtagctaatcgcattcttgaa
atgacaacaggagctatttttgttgctcataatgttaattttgattacaatgttgttcga
gaagaattcaagaatttaggacatacatttacccgaaaaaaattgtgcaccgtacgcctg
tctcgaaaattaatcccaggcttattctcttatagtttaggaagactttgtacatctctt
aatatacctttagaagggcgtcatcgggcagaaggagacactgatgccactgttatatta
tttcaacaaatcttgaccttagatccagaacaccttactataaatacttttctaaatgct
cgttctaaagaagcaacgttgccaccacatcttaacgtagaaactatcgattctttacct
gaagaaacaggcatttatttattcaaagatcaaaaaggtaatgtaatttatgcaggaaaa
gctaaaaatataaaacaacgagtaattagccacttttatgacaaaaagaacaaagaatac
gctcttggtcaaagtacatatactattgattatgaaataacaggtaatgaacttattgct
ttattattagaagcagaaaaaatacagaaatattaccccaaatttaatagtgcacaaaaa
aaacctgtagttccttttcgcatacttaaatataccaacagaaaaggaattatacaactg
gctatagatcgttctaagagtatagatcactcactagaaatattttatagacgatctgac
gcaatagaacaattagaaaaattatgctttgactatcaattatgtcctaaatactgtaat
ttactaaatactactgagcgctgttctcattatagaataaaaaattgcaaaggtatatgt
tgcgaggaagaatctgtggcattgtataatatgcgcgtacaaaaggctttaacttcttta
acaaaagaaaaagaaacatactttatcaaggaaaaagggagaactatgaatgaacatagt
tttataatgatacaagatggtatttataaaggttttggatatatagatcattctgaacag
ctatcaaccttagaggatttcgattcttttttaacttcacaaaagcatacataccacact
acaaaaattattaagagttatttacgtaaacatggagaaaacaatatagtttacttctga
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