Aquimarina sp. AD10: D1816_12905
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Entry
D1816_12905 CDS
T05712
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
aqd
Aquimarina sp. AD10
Pathway
aqd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aqd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D1816_12905 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aqd03400
]
D1816_12905 (ruvB)
Enzymes [BR:
aqd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D1816_12905 (ruvB)
DNA repair and recombination proteins [BR:
aqd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D1816_12905 (ruvB)
RecFOR pathway proteins
D1816_12905 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_22
AAA_3
Rad17
TIP49
AAA_18
AAA_14
nSTAND3
AAA_33
NB-ARC
AAA_16
RNA_helicase
TsaE
AAA_24
AAA_PrkA
NACHT
AAA_28
AAA_17
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AXT61207
UniProt:
A0A3A9W411
LinkDB
All DBs
Position
complement(3081819..3082841)
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AA seq
340 aa
AA seq
DB search
MNENLNPTNDNLSNEDLDIERALRPLTFEDFAGQDQVLENLRIFVQAANLRGEALDHTLF
HGPPGLGKTTLAHILSNELGVGIKVTSGPVLDKPGDLAGLLTNLDERDVLFIDEIHRLSP
IVEEYLYSAMEDYKIDIMIESGPNARTVQITLNPFTLIGATTRSGLLTAPMRARFGIQSR
LQYYTTELLATIVERSAHILNVPISMEAAIEIAGRSRGTPRIANALLRRVRDFAQIKGNG
KIDIEISKFALKALNVDAHGLDEMDNKILTTLIDKFKGGPVGITTLATAVSESAETIEEV
YEPFLIQQGFIMRTPRGREVTEAAYKHLGRIKGGIQGGLF
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaaatcttaatccaacaaacgataatttatctaatgaagatcttgatattgaa
agagcattaaggcctcttacatttgaagactttgctgggcaagatcaagtattagaaaat
cttaggatttttgttcaggcggctaatctaagaggagaggcactggatcataccctgttt
cacggtcctcctggtctaggaaaaacaactttagcacatattttatcaaacgaacttggt
gttggtataaaagtaacctctggaccggttttggataaaccgggagatctggcaggatta
cttactaatttagatgagagagatgttttatttatcgatgagattcaccgtctaagtcct
attgtagaagagtacttatattctgcaatggaagattataagatcgacattatgattgag
agtggtccaaatgcgcgtacagtgcaaattactcttaatccttttactcttatcggtgct
acaactaggtccggattactaactgccccaatgcgtgcacgttttggtattcaatcacga
ttacaatattatacaaccgaactccttgctacgatagtagaacgaagtgcacatattctt
aatgttcctatttctatggaagcagcaatcgaaattgcaggaagaagtagaggaacacca
agaattgctaatgctcttttacgaagagtacgagattttgcacaaattaaaggtaacggt
aaaatcgatattgaaatttcaaaattcgctttaaaagctttaaatgtggatgctcacggt
ttggatgagatggataataagattttaaccacattaatagataagtttaaaggtggccct
gttgggattacaactttggcaactgcagtaagtgaaagtgcagaaactatagaagaagta
tacgagccatttttaatacaacaaggatttattatgcgcactccacgcggtagagaagtt
actgaagcagcatataagcatctgggacgcatcaaaggcggaatccagggtggattattt
taa
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