KEGG   Aquimarina sp. AD10: D1816_13620
Entry
D1816_13620       CDS       T05712                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
aqd  Aquimarina sp. AD10
Pathway
aqd03030  DNA replication
aqd03430  Mismatch repair
aqd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:aqd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    D1816_13620
   03430 Mismatch repair
    D1816_13620
   03440 Homologous recombination
    D1816_13620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aqd03032]
    D1816_13620
   03400 DNA repair and recombination proteins [BR:aqd03400]
    D1816_13620
Enzymes [BR:aqd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     D1816_13620
DNA replication proteins [BR:aqd03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     D1816_13620
DNA repair and recombination proteins [BR:aqd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     D1816_13620
SSDB
Motif
Pfam: RNase_T DEDDh_C CAF1 DNA_pol_A_exo1 WASH-7_mid Rv2179c-like Phi812_tail_tube RNase_H_2
Other DBs
NCBI-ProteinID: AXT61341
LinkDB
Position
complement(3257359..3258021)
AA seq 220 aa
MGFWFKKNKEEYPDFWKEYEKLFDRKSKKSTFKDVRFVAFDTETTGFDYDNDRILSIGAV
GIKNKSIQVSDQIEVYLEQEIFKESTVEIHGIRKHGSLLKLSEKEALRLFIAYIEDAILI
AHHANFDKKMVNKALQRNGLGVLKNKILDTAVLFKKTKHLVYHTNSPVHYSLDELCNDLK
ISKSDRHTASGDAYITAIAFLKIVSKLFRNKKIELKSLLR
NT seq 663 nt   +upstreamnt  +downstreamnt
atgggattttggtttaaaaaaaataaagaagagtatcctgatttctggaaagaatatgaa
aagttatttgatagaaaaagtaaaaaatctacgtttaaggatgttcgttttgtggctttt
gataccgaaacgacaggttttgattatgataatgatagaatattatctattggagcagta
ggaattaaaaataaaagtattcaggtatctgatcaaattgaggtatatctagaacaggaa
atttttaaagagagtactgtagaaattcatgggatacgtaaacatgggagtttgctaaaa
ctttcagaaaaagaagcactgcgattatttattgcttatatcgaggatgctatcttgata
gctcatcatgcaaattttgataaaaaaatggtgaataaagcattgcaaaggaatggactg
ggggttttgaaaaataaaattttagatacagctgtattgtttaaaaaaacaaaacattta
gtgtatcatacaaatagtccagtgcattatagtcttgacgaattgtgcaatgatcttaaa
atatctaaaagtgataggcatacggcttctggtgatgcttatatcactgcaattgccttc
ttgaaaatagtctctaaattatttcgaaacaaaaaaatagaacttaaaagtttattgcga
taa

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