Aquimarina sp. AD10: D1816_16245
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Entry
D1816_16245 CDS
T05712
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
aqd
Aquimarina sp. AD10
Pathway
aqd00521
Streptomycin biosynthesis
aqd00523
Polyketide sugar unit biosynthesis
aqd00541
Biosynthesis of various nucleotide sugars
aqd01100
Metabolic pathways
aqd01110
Biosynthesis of secondary metabolites
aqd01250
Biosynthesis of nucleotide sugars
Module
aqd_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
aqd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
D1816_16245 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
D1816_16245 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
D1816_16245 (rfbC)
Enzymes [BR:
aqd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
D1816_16245 (rfbC)
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GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AXT61840
UniProt:
A0A3A9VNX8
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All DBs
Position
complement(3911634..3912188)
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AA seq
184 aa
AA seq
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MEIEPSFIKGCFVIKPKEIKDSRGSFFETFTKKKFYEVTGLRTDFVQDNQSISKKGVLRG
LHFQKGTHAQAKLVRVISGEVLDVVVDLRFNSETYGKHFSIVLNDKNNFQLFIPRGFAHG
FITLSKHSVFSYKCDNYYHKSAESGIIYNDPKLNINWRLDDSEIQLSEKDRELSFFKNID
VQDV
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atggaaattgaacccagttttataaaaggatgctttgttattaaaccaaaggagattaag
gatagtagaggctctttttttgagacgtttactaaaaaaaagttttatgaagtaacaggt
ctgcgaacggactttgtgcaagacaatcagtcaatctcaaagaaaggagtattaagaggt
ttgcactttcaaaaaggaacccatgcgcaggcaaagttagtaagagtaatttcgggagaa
gtattagatgttgttgttgatttgaggtttaattctgaaacatacggaaagcatttttcg
attgttttgaacgataaaaacaattttcaattatttattcccagagggtttgcgcatgga
tttatcacattgagtaaacattctgttttttcttacaaatgtgataattattaccataaa
tcagcagaatctgggattatctataatgacccaaaattaaatattaattggagattagac
gattctgaaattcaattatcagaaaaagatagagaattatcttttttcaaaaacatagat
gtacaggatgtctaa
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