Aquimarina sp. AD10: D1816_16335
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Entry
D1816_16335 CDS
T05712
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
aqd
Aquimarina sp. AD10
Brite
KEGG Orthology (KO) [BR:
aqd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
aqd01011
]
D1816_16335
Enzymes [BR:
aqd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
D1816_16335
Peptidoglycan biosynthesis and degradation proteins [BR:
aqd01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
D1816_16335
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
Motif
Other DBs
NCBI-ProteinID:
AXT61858
UniProt:
A0A3A9W0C7
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Position
complement(3939787..3941421)
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AA seq
544 aa
AA seq
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MRKTTSSFLFFLLVSFCAFAQKTKEHKTADTDKSKEILLEKSLTVQRDTVQVVDTTTQII
TTSNELQMTTLTKTSIKDSLTYAAKDYPKMSELDSLWKQELYNSSLFDTIYKSVTELAYE
PVEYVDLPTDTLKARLAELNARTPFNVEYNTSLESVIKNYLKNRHEHLNRLMALSEFYFP
LFEQELDNQNIPLEIKYLAIVESALKPRAKSRVGATGLWQFMFGTGKMYGLEVSSYVDER
MDPIMATQAACAYLAKLYKIFGDWDLALASYNSGPGNVTKAIRRSGGYTNYWNIRHNLPR
ETAGYLPAFLATMYIFEYADKHGFKPRKPEFAYFETDTIKVKQMISLDQVSEYMNIDMEE
LQFLNPSYKLDIIPYIKDENYVLRLPLDKIGPFVANEDQVYTLAKAEFDKREKPLPKYFE
ANDRIRYRVRSGDYLGKIARRYGVRVSQLKKWNRLRSNNLRVGQRLTVYPRRPVVNTTQK
ASSSKTTKAKTVTSTSELYTVKSGDTLWSISKKFKNISVENLKSWNDISGSGIKPGMKLR
LSKS
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaactacttcttcatttcttttttttctattggtttcattttgtgcatttgcg
caaaaaacaaaagaacataaaactgcagatacagataaaagcaaagaaatcttgttagaa
aagtctctaactgttcaaagagatacagttcaggtagtagatacaactacacagattatt
actacaagtaatgaattgcaaatgactacgctaactaaaacaagtataaaagatagccta
acctatgcagcaaaagactatccaaaaatgtctgagttagattctttatggaaacaagaa
ctatacaactctagtctttttgatacgatttataaatctgttacagaactagcatatgag
cctgtagaatatgttgatttacctacagatactttaaaagcaagattagcagagttaaat
gctcgaacaccatttaatgtagaatacaacacttctttagagagtgttatcaaaaattac
ttaaaaaacaggcacgaacacttgaacaggttgatggcacttagtgaattttattttcct
ctttttgaacaagaattagataatcaaaatatacctttagagattaaataccttgctatt
gtagaatcagctttaaaacctagagcaaagtctagagttggcgctacaggattgtggcag
tttatgtttggtacaggaaaaatgtatggcttagaagtaagctcatatgtagatgaacgt
atggatccaattatggccacccaagcggcttgtgcttaccttgccaaactgtataaaata
tttggagattgggatcttgctttagcatcatataattctggaccaggtaatgtaactaag
gcaattagacgtagtggtggttacactaattattggaatataagacataaccttccaaga
gagactgctggatatttgcctgcctttcttgccactatgtatatctttgagtatgcagac
aaacatggttttaaacccagaaaaccagagtttgcatattttgaaaccgatactattaaa
gtgaaacagatgatttcattagatcaggtttcagaatatatgaatatagacatggaggaa
cttcaattcttaaacccttcgtataaacttgatattataccgtatataaaagatgagaat
tatgtgttgcgtttgccgttagataaaataggcccttttgtagctaatgaggatcaagtg
tatacattggctaaagccgaatttgataaacgagagaaaccgcttcctaaatattttgaa
gctaatgacaggattagatatagagtacgaagtggagattatttgggaaaaatcgcccga
agatatggcgttagagtaagccaactaaaaaaatggaatagactacgtagtaataactta
agagtgggtcaacgtcttaccgtatacccaagacgtcccgtagtaaatacaactcaaaaa
gcatcttcttcgaaaactactaaagcgaaaacagttactagtacttcagaattgtacact
gttaaatcaggagatacgttatggagtatttctaagaagtttaaaaatatttctgtagaa
aacctaaaaagctggaacgatattagtggcagtggtattaaaccaggtatgaaattaaga
ctttctaaatcataa
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