Aquimarina sp. AD10: D1816_17640
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Entry
D1816_17640 CDS
T05712
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
aqd
Aquimarina sp. AD10
Pathway
aqd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aqd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D1816_17640 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aqd03400
]
D1816_17640 (xth)
Enzymes [BR:
aqd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
D1816_17640 (xth)
DNA repair and recombination proteins [BR:
aqd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
D1816_17640 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AXT62103
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All DBs
Position
4274922..4275686
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AA seq
254 aa
AA seq
DB search
MKIISYNVNGIRAAINKGFLEWLQQADPDVICLQEIKANKEQLDLEVFAEAGYSYNYWYS
AQKKGYSGVAILSKTEPDHIEYGTGIDYMDFEGRNLRADFNGVSIMSMYLPSGTNLDRLE
FKLKYMADLQTYINDLKKERPNLVILGDYNICHEAIDIHDPVRNKNVSGFLPVEREWIGN
FIESGFIDSFRHFNTEPHNYSWWSYRANARANNKGWRLDYGMVAEPLKDKLKRAVILSDA
KHSDHCPIVVELEL
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcatctcatacaatgttaacggaattagagctgcaatcaataaaggcttttta
gaatggttacaacaagcagatcctgatgtgatttgtttgcaggaaattaaagccaataaa
gaacaattagatcttgaggtttttgcagaggctgggtattcttataattattggtatagc
gcacaaaaaaaaggatatagtggtgttgctattctttctaagacagagcctgatcatatc
gagtatggtactggtattgattatatggattttgaaggacgtaatttaagagctgatttt
aatggtgtttctataatgagcatgtatctgccaagcggtactaatttagatcgtttagaa
tttaaacttaaatatatggcagaccttcaaacatatattaatgaccttaaaaaggaacgc
cctaatttagtaatattaggagattataatatatgtcatgaagccatagatattcatgat
ccggtacgtaataaaaatgtatctggatttttgccagtggaacgtgagtggattggtaat
tttatagaaagtggttttatagattcttttaggcattttaatacagaacctcataattat
tcttggtggagctatagagcaaatgcaagagctaataataaaggatggcgtttggattac
ggaatggtagctgaacctttaaaagataaactaaaaagagccgttatcttatcagatgct
aaacatagtgaccactgccctattgtggttgaactagaattataa
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