Aquimarina sp. AD10: D1816_18295
Help
Entry
D1816_18295 CDS
T05712
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aqd
Aquimarina sp. AD10
Brite
KEGG Orthology (KO) [BR:
aqd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aqd03016
]
D1816_18295 (truB)
Enzymes [BR:
aqd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
D1816_18295 (truB)
Transfer RNA biogenesis [BR:
aqd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
D1816_18295 (truB)
Prokaryotic type
D1816_18295 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Coilin_N
SAM_PNT
Motif
Other DBs
NCBI-ProteinID:
AXT62228
LinkDB
All DBs
Position
complement(4426096..4426803)
Genome browser
AA seq
235 aa
AA seq
DB search
MLTEKDYKDGQILLIDKELQWTSFQVVNKLRWLIRKNFNIKKIKVGHAGTLDPLASGLLI
ICTGKFTKRIQEFQGQVKEYTGTITLGATTPSYDLETEIDKTFPIDQISETEIKEATTQF
IGEIDQYPPVFSALKKDGKRLYEYAREGETVEINSRKITINEFEITRIELPEIDFRVVCS
KGTYIRSLAHDFGKALQNGGHLTSLRRTKIGSFLVDDAITVQSFENQLPTKVETT
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgctaaccgaaaaggattataaagacggtcagattcttctgattgacaaagaattacaa
tggacttctttccaagttgtgaataagcttcgttggctgattcgaaagaattttaatatc
aaaaaaataaaagttgggcacgcaggaactctggacccccttgcatcaggtttacttatt
atttgtaccggaaaatttacgaaacgtattcaagagtttcagggtcaagttaaagaatat
actggtacgattacacttggagcaacaactccgtcttacgatcttgaaacagaaatagac
aaaacatttcccattgatcaaatttctgaaactgaaataaaagaagctaccacacaattc
attggtgaaattgatcaatatccaccagtgttttcagctttaaaaaaggacggtaaacga
ttatatgaatatgctcgagaaggggaaacagtagaaattaattctagaaaaattactata
aacgaatttgaaatcacaagaatcgaactaccagaaattgattttagagttgtttgtagt
aaaggcacatatatcagatcattagcacatgattttggaaaggctttacaaaatggtgga
catttaacaagtttaagaagaacaaaaataggatcatttttagtagatgatgctattaca
gttcaatcttttgaaaaccagttaccgacaaaagttgaaactacataa
DBGET
integrated database retrieval system
