Aquimarina sp. AD10: D1816_20400
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Entry
D1816_20400 CDS
T05712
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
aqd
Aquimarina sp. AD10
Pathway
aqd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aqd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D1816_20400 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aqd03019
]
D1816_20400 (groL)
03110 Chaperones and folding catalysts [BR:
aqd03110
]
D1816_20400 (groL)
03029 Mitochondrial biogenesis [BR:
aqd03029
]
D1816_20400 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aqd04147
]
D1816_20400 (groL)
Enzymes [BR:
aqd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
D1816_20400 (groL)
Messenger RNA biogenesis [BR:
aqd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
D1816_20400 (groL)
Chaperones and folding catalysts [BR:
aqd03110
]
Heat shock proteins
HSP60 / Chaperonin
D1816_20400 (groL)
Mitochondrial biogenesis [BR:
aqd03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
D1816_20400 (groL)
Exosome [BR:
aqd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
D1816_20400 (groL)
Exosomal proteins of other body fluids (saliva and urine)
D1816_20400 (groL)
Exosomal proteins of breast cancer cells
D1816_20400 (groL)
Exosomal proteins of colorectal cancer cells
D1816_20400 (groL)
Exosomal proteins of bladder cancer cells
D1816_20400 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Pho88
NNH2
Motif
Other DBs
NCBI-ProteinID:
AXT62615
UniProt:
A0A3A9VEB8
LinkDB
All DBs
Position
complement(4925385..4927025)
Genome browser
AA seq
546 aa
AA seq
DB search
MAKDIKFDIEARDGIKRGVDALANAVKVTLGPKGRNVIISKSFGAPTVTKDGVSVAKEVE
LEDALENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVKEGLKNVAAGANPMDLKRGID
KAVEAITADLAKQTKEVGDSSDKIKQVAAISANNDETIGDLIAQAFGKVGKEGVITVEEA
KGTDTTVDIVEGMQFDRGYLSPYFVTNSEKMTADLETPYILLYDKKISAMKDLLPVLEPV
AQTGKPLLIIAEDVDGEALATLVVNKLRGALKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEERGFTLENTTIEHLGTAEKVAIDKDNTTVVNGSGAEDLIKNRVNQIKAQIETTTSDY
DKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALV
RAKSVLGDVKTENADEATGVQIVNRAIEAPLRTIVENAGGEGSVVIAKVLEGKADFGYDA
KSEAYVDMLKAGIIDPKKVTRIALENAASVSGMILTTECSLTDIKEEAPAAGGGMPPMGG
GMPGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatataaaatttgacatagaagcacgtgacggtataaaacgtggtgtggat
gcattagccaatgcagtaaaagtaactctaggaccaaaaggacgtaatgtaattatcagt
aaatcttttggcgctcctactgtaactaaagatggagtttctgtagcaaaagaagttgag
cttgaagatgctcttgaaaacatgggagctcaaatggtaaaagaagtagcttcaaaaacc
aatgaccttgctggtgatggtacgactactgcaaccgtattggcccaagcaattgtaaaa
gaaggacttaaaaacgtagcagctggtgccaacccaatggatcttaaacgtgggattgac
aaagctgtagaagctattactgctgatcttgcaaaacaaactaaagaagttggtgattct
tcagataaaattaaacaagtagctgctatttcggctaataatgatgaaactatcggtgac
cttatcgctcaagcttttggcaaagtaggtaaagaaggtgtaatcactgtcgaagaagca
aaaggtactgatactactgtagacatcgtagaaggtatgcaatttgacagaggatacctt
tcaccttatttcgttacaaatagcgaaaaaatgactgctgatcttgagactccatacatc
ttattgtatgataagaaaatttctgctatgaaagatttgttaccagtgcttgagcctgtt
gctcaaactgggaaacctcttttgattattgcagaagatgtagacggagaagcattagct
acacttgtagttaacaaactacgtggcgcattaaaaatagccgctgttaaagctcctggt
tttggcgacagacgtaaagctatgttagaagatatcgctattctaactggaggtacagtt
atttctgaagagcgtgggtttacattagaaaacactactattgagcacttaggtactgca
gaaaaagtagctattgacaaagataatactactgtagtaaacggttctggtgcagaagat
ttaatcaaaaacagagtaaatcagatcaaagctcaaatagaaactactacttctgattac
gacaaagaaaaactacaagagcgtcttgctaaattagcaggaggtgtagccgtgctatat
gtaggtgctgcttctgaagtagaaatgaaagaaaagaaagatcgcgtagatgatgcatta
cacgctactcgtgccgcagtagaagaaggaattgttgccggtggtggtgttgctttagta
agagctaaatctgtactaggtgacgtgaaaactgaaaatgcagacgaagcaacaggtgta
caaattgtaaaccgtgcaattgaagctccattaagaactatagttgaaaacgcaggtgga
gaaggttctgtagttattgccaaagtacttgaaggaaaagctgattttggttatgacgct
aaatcagaagcatatgttgacatgcttaaagcagggattattgatcctaaaaaagtaaca
cgtattgctttagaaaatgcagcatctgtatcaggaatgatccttacaacagaatgttca
ttaacagacatcaaagaagaagctcctgctgcaggaggtggtatgccaccaatgggcgga
ggaatgcctggcatgatgtaa
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