Aquimarina sp. AD10: D1816_22420
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Entry
D1816_22420 CDS
T05712
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
aqd
Aquimarina sp. AD10
Brite
KEGG Orthology (KO) [BR:
aqd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aqd03016
]
D1816_22420 (truA)
Enzymes [BR:
aqd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
D1816_22420 (truA)
Transfer RNA biogenesis [BR:
aqd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
D1816_22420 (truA)
Prokaryotic type
D1816_22420 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Acid_PPase
Motif
Other DBs
NCBI-ProteinID:
AXT62977
UniProt:
A0A3A9VP75
LinkDB
All DBs
Position
5397548..5398294
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AA seq
248 aa
AA seq
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MRYFLELSYNGTLYHGWQRQPNAISVQEVLEDALSLILRAKIVIVGAGRTDTGVHAKQIM
AHFDFAGKLEYDVLKYKLNSVLPSEIAIRCVRSVKENAHARFDALSRSYEYFVTLEKDPF
EIKRSYYIKKPLDLDLMNEAAKLLLNYTNFKCFSKSKTDVKTYNCTITNAIWEKDKDQLV
FKISANRFLRNMVRAIVGTLIEIGEHKLTKEDLIRIIKSEDRGQAGYSVPAHGLYLTKVD
YPKTIYTK
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
ttgagatattttttagaactttcttataacggaactttatatcatggttggcaacgtcaa
cctaatgcgatttcagttcaagaagttttagaagatgctttatccttaattttaagagcc
aaaattgtaattgtaggcgccggaagaacagatactggggtgcatgcaaaacaaattatg
gctcattttgattttgcaggaaaattggaatatgatgttttgaagtataaacttaattcg
gtcttgccttcggagatagctatccggtgtgtgcgaagtgtgaaagaaaatgcacatgca
agatttgatgcattaagtagatcctatgaatattttgttactttagaaaaagatcctttt
gaaattaaaagatcttactatataaagaaaccattggatctggatctaatgaatgaagct
gctaaattactgttaaactatacgaattttaaatgcttcagtaagtccaaaaccgatgta
aaaacgtataattgtaccattacaaatgcgatttgggagaaagataaagatcaacttgtt
ttcaaaatttcagcaaatcgtttcttaagaaatatggtaagagcaattgtcggaaccctt
atcgaaataggagaacataaattgactaaagaagatttaataaggattattaaaagtgaa
gatcgcggacaggcaggctattctgtgcccgcacacggtttatacttaacaaaggtagat
tatcctaaaacaatatatacaaaatag
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