Aquimarina sp. AD10: D1816_25280
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Entry
D1816_25280 CDS
T05712
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
aqd
Aquimarina sp. AD10
Pathway
aqd03030
DNA replication
aqd03430
Mismatch repair
aqd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aqd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D1816_25280
03430 Mismatch repair
D1816_25280
03440 Homologous recombination
D1816_25280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aqd03032
]
D1816_25280
03400 DNA repair and recombination proteins [BR:
aqd03400
]
D1816_25280
Enzymes [BR:
aqd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D1816_25280
DNA replication proteins [BR:
aqd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D1816_25280
DNA repair and recombination proteins [BR:
aqd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D1816_25280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
RNase_H_2
GIY_YIG_2
DEDDh_C
Rv2179c-like
T5orf172
DUF7508
DNA_pol_A_exo1
FapA_N
Motif
Other DBs
NCBI-ProteinID:
AXT63514
LinkDB
All DBs
Position
complement(6042922..6044295)
Genome browser
AA seq
457 aa
AA seq
DB search
MYAILDIETTGGKYNEEGITEIAIYKFDGHEVVDQFITLVNPERPIQPFVANLTGINNEM
LRNAPKFFEVAKRIVEITTDCVVVAHNSSFDYRILRTEFDRLGFDYERHSLCTVELSKKL
IPDQESYSLGKLVRSLGIPLSDRHRANGDALATVKLFKLLLSKDVEKDIITDTVRADTRR
QMDDKLLRLLEKAPIATGVYYIHREDGKIIYIGKSKNIKKRLNQHFTNDNKKSRRIQTEV
TSVSYEITGSELVALLKENEEIKRNRPKYNRALRKSKFDQALYQFVDNNGYINLKIGKND
NRKKNITTFSNRQQAKSYMHKWAETFRLCQRLMGLDSGTGNCFNYSIKQCNGACILDESP
EEYNERVQELILKNSFENQDMLIIDRGRNIDEQSAILIEEGKFIGVGHFTLNHQINNIEI
LRSIITPMSHNRDAKHIIQSYVRQNKKLKITKLPKND
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcaattttagatatagaaactaccggtggtaagtataatgaagaaggtattact
gaaattgctatctataaatttgatggacatgaggttgtcgatcagtttatcactctagtt
aatcccgaaagaccaatacaaccctttgtagccaatctaactgggattaataacgaaatg
ttgcgtaatgctcctaagtttttcgaagtcgccaaaagaattgttgaaatcacaacagat
tgcgttgttgtagctcacaattctagttttgattatcgtattcttcgaacagaatttgat
agactaggttttgattatgaaagacactcactttgtactgtcgaactatcaaaaaaatta
attcctgatcaagaatcctacagccttggtaaattagttcgtagtttaggtattcctctt
tctgaccgtcatcgtgcaaatggtgacgccttagccactgttaagttattcaaactttta
ttaagtaaagatgtagaaaaagacatcattacagataccgttcgtgcagatacaagacgt
caaatggacgataaattgttaaggctactagaaaaagcccctattgctaccggagtatac
tatatacatagagaagatggtaaaatcatttacatcggaaaaagtaaaaacattaaaaaa
cgtcttaatcagcattttacaaatgataataaaaaatctagaagaattcaaacagaagtc
actagtgtttcctatgaaattacgggtagcgagctcgttgcattgttaaaagaaaatgaa
gaaataaaacgaaatagacccaaatacaatagagcattaaggaaaagcaaatttgaccaa
gctttatatcagttcgtagataataacggatatattaatcttaaaatagggaaaaacgat
aatcgcaaaaaaaatattactacattttcaaatagacaacaagctaaatcatatatgcat
aaatgggcagaaacttttcgtttatgtcaacgattaatgggattggactctggaacagga
aattgctttaattattctataaaacaatgtaatggtgcttgtattctggacgaatctcct
gaagaatacaatgaacgagtacaagaactgattctaaaaaactcatttgaaaatcaagat
atgcttattatagatcgaggtagaaatattgatgaacaaagtgctatcttaatagaagaa
ggaaagtttataggggttggtcattttaccttaaatcatcaaataaataatatagaaatt
ttacgatctattattacccccatgagtcataatagggatgccaaacacataatacaaagt
tatgttcggcagaataaaaaattgaagattaccaaattgcctaaaaatgattaa
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