Aquimarina sp. ERC-38: NBT05_01950
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Entry
NBT05_01950 CDS
T09583
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
aqe
Aquimarina sp. ERC-38
Pathway
aqe03030
DNA replication
aqe03410
Base excision repair
aqe03420
Nucleotide excision repair
aqe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aqe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NBT05_01950 (polA)
03410 Base excision repair
NBT05_01950 (polA)
03420 Nucleotide excision repair
NBT05_01950 (polA)
03440 Homologous recombination
NBT05_01950 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aqe03032
]
NBT05_01950 (polA)
03400 DNA repair and recombination proteins [BR:
aqe03400
]
NBT05_01950 (polA)
Enzymes [BR:
aqe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NBT05_01950 (polA)
DNA replication proteins [BR:
aqe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NBT05_01950 (polA)
DNA repair and recombination proteins [BR:
aqe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NBT05_01950 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NBT05_01950 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
RNase_H_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UZO81249
LinkDB
All DBs
Position
444580..447405
Genome browser
AA seq
941 aa
AA seq
DB search
MSQKRLFLLDAYALIFRGYYALIKNPRINSKGLDTSAIMGFVNSMFDVIKREKPDHLAVA
FDKEGSSARVEMFADYKANRDETPEAIRIAIPTIHKILEAMHIPIIEEAGVEADDLIGTI
AKQAEKEGFQVFMVTPDKDYAQLVSENIFMYKPARMGNGIEIWGIPEVQKRFEVERPEQV
IDYLGMMGDSVDNIPGLPGIGDKTAKKFIAAYGSIEGLFENIDQLKGKMREKVAANQELG
LLSKKLATIMIDCDVTFNAKNYELSKPDFEQVQVLFEELEFRRLRDQFLKLFSDEDTSVT
QVTSTSTAKQQATTAGAGQFSLFDTNVANGEAPSFNSRKTIENTPHFYQNISQGLGLELF
LSKLSKQKQVCFDTETTGLDALTAELVGIAFSWEAHKGYYLPFPSEKEEVQQLIEKLRPF
FEDEANTKIGQNLKYDIKVLEKYDVEVKGTLFDTMLAHYLINPDMRHNMDVLSETYLDYT
PVSITELIGKKGKNQKSFREVPVEQQTEYAVEDADITFQLASYFTPELNEANTLSLFNDI
EIPLLRVLAAMESEGINLDEGFLNSLSTDLDTDIKKLETSIYETAGEEFNIGSPKQLGTV
LFDKLKLVDKPKKTKTGQYSTAEDVLSYLAKDHTIIQDILDYRGLSKLKSTYVDALPNQV
NKKTGRVHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRQVRKAFIPRDENYILLAADYS
QIELRIIAALSQEETMMQAFTNNEDIHASTASRVFNVPLEEVTREQRSNAKTVNFGIIYG
VSAFGLSNQTNLSRAESKELIDTYYKTYPKLRQYMSGQVDFAREHGYVQTVLGRRRYLKD
ITSANNVVRGAAERNAVNAPIQGSAADIIKIAMISIYNKLKEGNYKTKMLLQVHDELVFD
VHKDELQEVSKMIQYEMENAYKLEVPLDVELGTGQNWLEAH
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaaaacgcttgtttttactggatgcctatgcattgatttttagaggttattac
gcgttaattaaaaaccccaggatcaattccaaaggcttagatacttctgctataatgggg
tttgtaaattcgatgtttgacgtgataaaacgagaaaagccggatcatctggcagttgct
tttgataaagaaggcagctcggcaagagtagaaatgtttgcggactacaaagcgaatcgt
gatgaaaccccggaagccatccgtattgccatcccaaccattcataaaatcttggaagcc
atgcatatccctattattgaagaggcaggcgtagaagcagatgacttaataggtacgatt
gctaaacaagctgaaaaagaagggttccaggtatttatggttactcccgataaagattac
gcacaactagtttctgaaaatatctttatgtataaacctgcccggatgggaaatggcatt
gaaatctggggaatcccagaagtgcaaaaaaggtttgaagtagaacgccctgagcaggtt
attgattacctcggaatgatgggggattcggttgataatattcccggattaccgggtatc
ggtgataaaacggctaagaagtttatagctgcttacggttctatagaaggcttgtttgaa
aacatcgatcagttaaaagggaagatgagagaaaaagtagccgccaatcaggagttagga
ttgctttctaagaagttggctaccattatgatcgactgtgatgttacttttaatgctaaa
aactacgaactttccaaaccggatttcgaacaagtacaggtgttatttgaagaattggaa
ttccgccgcttgcgggatcagtttttaaaattattttcagatgaggatacttcggtgaca
caggtcacttctacctctaccgcaaagcaacaggcgactaccgcaggggctggtcagttc
tctttatttgatacgaatgtggcaaacggagaagcaccatcctttaacagtcgaaaaact
attgaaaatacacctcacttttatcagaacataagtcagggactgggattagaattattt
ttaagtaagctttctaaacaaaaacaagtatgttttgatacggaaactacaggactggac
gctctaaccgcagaattagttggaattgccttctcttgggaagctcataaaggctactac
ttaccttttccttcagaaaaagaagaagtacagcaactgattgaaaaactacgtccgttt
tttgaagatgaagccaatactaaaattggtcaaaacttaaagtacgatattaaagtcctg
gagaaatatgatgtagaggtaaaaggaacactcttcgataccatgttggcacattatctg
atcaatccggatatgcgtcataatatggatgttttatccgaaacctatctggactacact
cccgtctcaattactgaacttattggaaaaaaaggaaagaaccaaaaatcctttagagaa
gttcccgttgaacaacaaacagaatatgccgtagaagatgcggatattacttttcaatta
gccagctattttacccccgaattaaatgaagccaatacgttaagcctttttaatgacatt
gaaattccgttattaagagtcctggctgctatggaatctgaagggattaatctcgatgaa
ggctttttaaatagcttgtctacggatctggatacggatattaaaaaattagaaacttct
atctatgaaacagcaggagaagaatttaatatcggctcccctaaacaattaggaactgtt
ctttttgacaaattaaaactggttgacaaaccaaagaaaacaaaaaccggccaatattca
accgcagaagatgtactttcttatctagctaaagaccatacaatcattcaggatattttg
gattaccgcggattatccaaattaaaaagcacctatgtagatgccttacctaaccaggta
aataaaaaaaccggcagggtgcatacggattatatgcaaacggttgctgccaccgggcga
ttaagctctaacaatcctaacttacaaaatattccgatccgaactgaaaggggtcggcaa
gttcgtaaagcttttattccgcgagatgaaaattatatcttacttgctgcagattattct
caaatagaacttcggattattgcggctttaagtcaggaagaaaccatgatgcaggccttt
actaacaacgaagacattcatgcttccacggcttcccgggtatttaacgttccactagaa
gaagtcacccgcgaacaacgaagcaatgcaaaaacggtaaattttggtatcatctatggg
gtttccgcttttgggttaagcaatcagaccaatctatcccgagcggagtctaaagaattg
attgacacatattataaaacttatcccaaactacgccaatatatgagcggacaggtagat
tttgccagggaacatggatatgtacaaacggttctgggcagaagacgatatttaaaagat
attacctcagcaaacaatgttgtcaggggagccgccgaacggaatgctgtaaatgccccg
attcaaggaagtgctgccgatattattaaaattgccatgatttctatttacaacaaatta
aaagaaggtaattacaagacaaaaatgctattacaagtgcatgatgaattggtttttgac
gtccataaagatgaactacaagaggtatctaagatgatccaatacgaaatggaaaacgct
tacaaattagaagtacctcttgatgttgaactaggaaccgggcaaaattggctggaggcg
cattaa
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