Aquimarina sp. ERC-38: NBT05_02100
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Entry
NBT05_02100 CDS
T09583
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
aqe
Aquimarina sp. ERC-38
Pathway
aqe00550
Peptidoglycan biosynthesis
aqe01100
Metabolic pathways
aqe01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
aqe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NBT05_02100 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NBT05_02100 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
aqe01011
]
NBT05_02100 (mrdA)
Enzymes [BR:
aqe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NBT05_02100 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
aqe01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
NBT05_02100 (mrdA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
UZO81277
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Position
478676..480547
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AA seq
623 aa
AA seq
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MRKVLLYLIIISTGLIFVSRLFYLQVLNTSFAALSEDNAIKMIYDYPQRGAVYDRNGKLL
VTNQPSYDVMVIPREVKAFDTLEFCGILGITKERLLKQLKKASVYSPRVPSVVIPQLTKD
EYAYLQEKMRKFTGFYIQKRSLRDYQTENAANVLGYIGEVNEALIRKNPYYLSGDLIGMS
GVEKQYENELRGIKGVKRIQKDRFNRDIGPYKDGKFDTLPVNGNDLTISIDIDLQAYGEK
LMQGKRGGIVAIEPASGEILAMVTAPSYKPELLVGRKRSPNFTKMYYDTIAQPLFDRGVK
GAYPPGSPFKTINALIGLQEEVVTTEDRFSCRNGYYYGKSRRRFGCHSHRSPLNMIPGIS
YSCNAYFANVYLRIINKFDTPQEGIETWRKHVESFGLGNFLNNDLPTGNSGKVPTAKYYD
KVYQYPKYKWFATNTISNSIGQGEVLATPLQLANMTAAIANRGYYITPHMLKKREGKPIT
DPNYMQPKYTTIDTKHFEPVVEGMHQVFTQGTASFLQSPGIDICGKTGTAENFTKIDGER
VQLTDHSVFIAFAPKDNPKIALSVFVENGHYGSKYAGRMATLMIEKYLKEKIERTDLEDW
VFSHSLEEEYAKPLSGEPFKINQ
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaggtgctgttgtatctgattattatatctaccggacttatatttgtttcccgt
ctattttatttacaggttttaaatacttcttttgcagcattgtctgaagataatgcaatc
aaaatgatttatgactatccgcaacgaggtgctgtttatgatagaaacggtaaattattg
gtgaccaatcaaccttcttacgatgttatggtaattcccagggaagtcaaagcttttgac
actttggaattctgcggaattttagggattactaaagaacgtttacttaaacaactgaaa
aaagccagcgtatattctccacgtgtgccttcggtagtaattcctcaattaactaaagat
gaatacgcctatttacaggaaaaaatgcgaaaatttaccggtttttacattcaaaaacgt
tcactaagggattaccaaaccgaaaatgctgctaatgtactaggctatatcggtgaagtt
aacgaagctttgatccgtaaaaatccatattacttatccggggatttaattggaatgagt
ggtgtcgaaaaacagtatgaaaatgaactacgcggtattaaaggagttaaacgtattcaa
aaagatcggtttaaccgtgacattggtccttataaagatggaaaatttgacaccttgccg
gtcaacggaaatgatttaaccattagcatagatattgatctgcaagcctacggcgaaaaa
ttaatgcaggggaaaagagggggtattgttgctatcgaaccggcctccggcgaaattctg
gcaatggttaccgcacccagctataaaccggaattattagtgggacgaaaacggtctcct
aattttactaaaatgtattacgatactattgcgcaacccctttttgaccgaggtgtcaag
ggagcctatccaccagggtctccatttaaaaccattaatgcgttgattgggttacaggaa
gaagtagtaaccaccgaggatcgttttagttgccgtaacgggtattattacggtaaaagc
cgaaggcgtttcgggtgtcattcgcatcgtagtcctttaaatatgattccgggaatttct
tactcttgtaatgcttattttgccaatgtatacttacgaattattaataaatttgatact
ccgcaggaaggtattgaaacctggcgaaagcatgtagaaagttttgggcttggtaatttt
ttaaacaacgacttgcctaccggaaattcaggaaaagtacctaccgccaagtattatgat
aaggtgtaccaatacccaaaatataaatggtttgccactaatactatttctaattctatc
ggacaaggggaagtcctggctacccctttacaactggcaaatatgacggctgctattgcc
aatcgtggctattatatcactccgcatatgttaaaaaagagagaaggaaaaccgatcacc
gacccgaattatatgcaacccaagtatacgaccattgatacaaaacattttgaaccggtg
gtagaagggatgcaccaagtatttacacaaggtacagccagttttttacaatcccccggt
attgatatctgtggaaaaacaggaacggctgagaattttactaaaattgatggcgaacgg
gtacagttaacggatcattcggtctttattgcttttgctcccaaagataatcctaaaatt
gccttatcagtattcgtagagaatggacattatggttcaaaatacgcaggtaggatggct
accttgatgattgaaaaatacttaaaagaaaagattgaacgtaccgacctggaagactgg
gtatttagtcattccttagaagaagaatatgccaaacctcttagcggggaaccttttaaa
atcaaccaataa
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