Aquimarina sp. ERC-38: NBT05_02900
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Entry
NBT05_02900 CDS
T09583
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
aqe
Aquimarina sp. ERC-38
Pathway
aqe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aqe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NBT05_02900 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aqe03019
]
NBT05_02900 (groL)
03110 Chaperones and folding catalysts [BR:
aqe03110
]
NBT05_02900 (groL)
03029 Mitochondrial biogenesis [BR:
aqe03029
]
NBT05_02900 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aqe04147
]
NBT05_02900 (groL)
Enzymes [BR:
aqe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
NBT05_02900 (groL)
Messenger RNA biogenesis [BR:
aqe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
NBT05_02900 (groL)
Chaperones and folding catalysts [BR:
aqe03110
]
Heat shock proteins
HSP60 / Chaperonin
NBT05_02900 (groL)
Mitochondrial biogenesis [BR:
aqe03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
NBT05_02900 (groL)
Exosome [BR:
aqe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NBT05_02900 (groL)
Exosomal proteins of other body fluids (saliva and urine)
NBT05_02900 (groL)
Exosomal proteins of breast cancer cells
NBT05_02900 (groL)
Exosomal proteins of colorectal cancer cells
NBT05_02900 (groL)
Exosomal proteins of bladder cancer cells
NBT05_02900 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
MT0933_antitox
Motif
Other DBs
NCBI-ProteinID:
UZO81429
LinkDB
All DBs
Position
658945..660585
Genome browser
AA seq
546 aa
AA seq
DB search
MAKDIKFDIEARDGIKRGVDALANAVKVTLGPKGRNVIIGKSFGAPQVTKDGVTVAKEVE
LENALENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVKEGLKNVAAGANPMDLKRGID
KAVEAITKDLEKQSQEVGSSSDKIKQVASISANNDETIGDLIAQAFGKVGKEGVITVEEA
KGTDTYVDVVEGMQFDRGYLSPYFVTDSEKMTADLESPYILLYDKKISAMKDLLPVLEPV
AQTGKPLLIIAEDVDGEALATLVVNKLRGALKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEERGFTLENTTIEHLGTAEKVAIDKDNTTVVNGAGGEDLIKNRVNQIKSQIETTTSDY
DREKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALV
RAKSDLNKIKTENADEATGIQIVARAIEAPLRTIVENAGGEGSVVISKVLEGKKDFGYDA
KSEDYVDMLKAGIIDPKKVTRVALENAASVSGMILTTECALTDIKEDAPAGGGGMPPMGG
GMPGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatataaaatttgatattgaagcgagagatggcattaaacgtggagttgat
gcattagcaaacgcggtaaaagttactttagggcctaaggggcgtaatgtaattatcggt
aaatctttcggagcacctcaggtaacaaaagatggggttacagttgctaaagaagtagag
ctggaaaacgctcttgaaaatatgggagcacaaatggttaaagaagttgcttcaaaaaca
aatgacctggctggtgacggtaccactacggcaactgttttagcccaggcaattgtaaaa
gaaggccttaaaaacgtagctgctggtgcaaatcctatggatttgaaaagagggattgat
aaagcagtagaagctattactaaagacttagaaaaacaatctcaagaagtaggaagttct
tcagataaaattaagcaggtagcttctatatcagctaataatgatgaaactatcggagat
ttaattgctcaggctttcggaaaagtgggaaaagaaggggtgatcactgtggaagaagca
aaaggaacggatacttacgtagatgtcgtagaagggatgcagtttgaccgaggttactta
tctccttactttgtaacagatagtgaaaaaatgacagctgacttagaaagtccgtatatc
ttactatacgacaagaaaatttcggctatgaaagatttactaccagtattagaacctgta
gcgcaaaccggaaagcctttattaattattgcagaggatgttgacggagaagctttggct
accttagttgtaaacaaactaagaggtgcgttgaagattgctgcggtaaaggctcctggt
tttggagatcgtcgtaaggcaatgttagaagatattgcaatcttaactggtggtacggta
atttctgaagaaagaggatttactttagaaaatacaaccattgaacatttaggaaccgct
gaaaaagtagctatcgataaagataatactacggtggttaatggtgctggtggcgaagat
ttgattaaaaaccgggtaaatcaaattaaatctcagattgaaacgactacttctgattat
gaccgtgagaaattacaggagcgtttagccaagttagctggtggtgttgcggtgctttac
gtgggtgcagcttctgaagtagaaatgaaagagaagaaagaccgtgtagatgatgcttta
catgctacccgtgcagcggttgaagaaggtattgttgccggaggtggtgttgccctggta
cgtgctaaatctgatcttaataagattaaaacggaaaacgctgatgaagctacaggaata
caaattgttgcccgtgcgattgaggctcctttacgaactattgtagagaatgctggtggt
gaaggttccgtagtaatttctaaagtattagaaggtaaaaaagattttggatatgatgca
aaatccgaagattatgtggatatgttaaaagcgggtattattgatcctaaaaaagtaacc
cgtgttgctttggagaatgcagcatccgtatccggaatgattttgactaccgaatgtgca
ttaacagatattaaagaagatgctcctgccggaggaggcggaatgccaccgatgggtgga
gggatgccgggaatgatgtaa
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