Aquimarina sp. ERC-38: NBT05_04225
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Entry
NBT05_04225 CDS
T09583
Name
(GenBank) ribonuclease E/G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
aqe
Aquimarina sp. ERC-38
Brite
KEGG Orthology (KO) [BR:
aqe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aqe03019
]
NBT05_04225
03009 Ribosome biogenesis [BR:
aqe03009
]
NBT05_04225
Messenger RNA biogenesis [BR:
aqe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NBT05_04225
Ribosome biogenesis [BR:
aqe03009
]
Prokaryotic type
rRNA processing factors
NBT05_04225
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
DUF6305
DUF6395
Motif
Other DBs
NCBI-ProteinID:
UZO81682
LinkDB
All DBs
Position
complement(980410..981951)
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AA seq
513 aa
AA seq
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MNKELIIRSGDSTNFALLKDGKLIELHKEEDNSDFSVGDIFIAKIRKAVPGLNAAFVNVG
YEKDAFLHYHDLGPQVASLLKFIKGVSSGKQKNYLLKDFPFEKDIDKHGVITNVLKSNQS
LLVQIVKEPISTKGPRISSELSIAGRYIVLVPFSKRISISQKIESNEEKDRLKRLVKSIR
PKGFGIIVRTVAEGKKVAELDKDLQNLLERWESMCKKIYKAHHPSKVLGEMNRASSILRD
VFNDSFSSIVVDNEELYHNIKESVLEMAPKKESIVKLHNSRIPIFEKYGIERQIKTSFGK
TVSMSKGAYLVIEHTEAMHVIDVNSGNRSNKAKNQEDTALEVNLISATEVARQLRLRDMG
GIIVVDFIDMNNANNRRTLFNHLKEEMKDDRAKHKILPPSKFGLIQITRQRVRPEMKIKT
REENPSGGDQEVEAPIVLLDKIQVDLEKILKKEHKKVSLSAHPFIAAYLTQGFPSTRSKW
FLDHKKWIKVVPRDAYTYLEYHFHDQEGDLIQV
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaagaattgataatcagatcaggtgactctacaaattttgccttgttaaaggac
ggaaaacttattgaattacataaagaagaagataacagcgatttttctgtaggtgatatt
tttatcgctaaaattagaaaagcagttcccggtctaaatgccgcatttgtgaatgtaggt
tatgagaaagatgcctttttgcattaccatgatttaggcccacaggtagcttctttatta
aaatttattaaaggtgtgagttcaggaaaacaaaagaactacttgttaaaagattttcct
tttgaaaaagatattgataaacatggggtaattaccaatgtgttaaaatcaaatcaatct
ttacttgtacaaattgtaaaagaaccgatttcgactaaaggtccgagaatcagttcagaa
ttatccattgcaggacgttatattgttttagttccgttttctaaaagaatttctatttcg
caaaaaatagagtctaatgaagaaaaagaccggttaaaacgattagtaaaaagtatccga
cccaaaggttttggtattatcgtacgtaccgtcgcagaaggcaaaaaagtagcagaactt
gataaagatttacaaaacttgctagaaaggtgggagtctatgtgtaaaaagatatacaaa
gcgcatcacccttctaaagttttaggggaaatgaatcgtgcatcttctattttaagagat
gtatttaatgattccttttcatccattgttgtcgacaatgaagaactttaccataatatc
aaagaaagtgtcctggaaatggcaccaaaaaaagaatctatcgtgaagttacataattcc
cgaattccgattttcgaaaaatacggaatagaaagacaaattaaaaccagttttggtaaa
accgtatctatgagcaaaggcgcttatctggtcattgaacataccgaagccatgcacgtt
attgacgtgaacagtggtaacaggtcaaacaaagcaaaaaaccaggaagataccgcatta
gaagtcaatctaattagcgctactgaggtagcaagacaattacgcctccgcgatatggga
ggtattattgtagttgattttattgatatgaataatgcaaacaaccgaagaacgctcttt
aatcatttaaaagaagaaatgaaagatgatagagcaaaacataaaattttaccacctagt
aagtttggtttaattcaaataaccagacaacgtgttcgacccgaaatgaaaattaaaacc
cgggaagaaaatccaagtggtggtgaccaagaggttgaagcacctattgtattgttagat
aaaatacaagtagaccttgagaaaattttaaaaaaggagcacaaaaaagtttctttaagt
gcacatccttttattgcggcatacttaacacagggttttccttctactagatccaagtgg
tttttagaccataaaaagtggattaaagtagtacccagagatgcctatacttatttagaa
tatcattttcatgaccaggaaggtgatttaattcaagtataa
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