Aquimarina sp. ERC-38: NBT05_04805
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Entry
NBT05_04805 CDS
T09583
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
aqe
Aquimarina sp. ERC-38
Brite
KEGG Orthology (KO) [BR:
aqe00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
NBT05_04805 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aqe03019
]
NBT05_04805 (rnc)
03009 Ribosome biogenesis [BR:
aqe03009
]
NBT05_04805 (rnc)
03036 Chromosome and associated proteins [BR:
aqe03036
]
NBT05_04805 (rnc)
Enzymes [BR:
aqe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
NBT05_04805 (rnc)
Messenger RNA biogenesis [BR:
aqe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NBT05_04805 (rnc)
Ribosome biogenesis [BR:
aqe03009
]
Eukaryotic type
90S particles
RNase
NBT05_04805 (rnc)
Prokaryotic type
rRNA processing factors
NBT05_04805 (rnc)
Chromosome and associated proteins [BR:
aqe03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
NBT05_04805 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
Mycovirus_RNAse
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
UZO81787
LinkDB
All DBs
Position
1118887..1119621
Genome browser
AA seq
244 aa
AA seq
DB search
MGVIKNILNSRSEKNGIFFTRIQDIVGFKPKSILHYEKAFTHRSLNLKDKNGNAVNYERM
EFLGDAMLSSVIAAYLFKEVPEGNEGYLTKMRAKVVSRKHLNELGKDLKLIELVRTNISK
SQFGVNIHGNLFEALIGAIYLDRGFKYCERFINEAVIKPYVDIDSLEGQIISYKSLLIEW
CQKEKKHFNFEVYEDTGKDEMKHFAVKLWIAQKVVAKARATSKKKAEEKSSKRAYFALQS
KIDS
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtaataaagaacatattaaattcccgctctgaaaagaacgggattttttttacc
agaattcaggatattgttggttttaagcctaaaagtattctacattatgaaaaagcattc
acccatcgctccctgaaccttaaagataaaaacggcaacgctgttaactacgagcgtatg
gaatttctcggagatgctatgttgagtagcgtgattgccgcttatttatttaaagaagta
cctgaaggtaatgaaggatacctcactaaaatgcgagcaaaagtagtaagccgtaagcac
ttaaatgaattggggaaagacttaaaacttattgaattagtccgtactaatatttctaaa
tcccagtttggggtcaatattcatggaaacctatttgaagccctgataggagctatttac
ctggatagggggtttaagtattgtgagcgttttatcaacgaagccgttattaaaccttac
gtggatattgatagtctggaaggacagattattagttataaaagcctattaattgagtgg
tgccagaaagaaaagaaacattttaactttgaagtatatgaagatacgggtaaagatgaa
atgaaacattttgcggtaaaactatggattgcacaaaaagtagtggctaaagccagggca
acttcaaaaaagaaagcggaagaaaaatcttcaaaacgagcctattttgcactgcaatcc
aaaattgattcgtaa
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