Aquimarina sp. ERC-38: NBT05_06695
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Entry
NBT05_06695 CDS
T09583
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
aqe
Aquimarina sp. ERC-38
Brite
KEGG Orthology (KO) [BR:
aqe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aqe03400
]
NBT05_06695 (radA)
DNA repair and recombination proteins [BR:
aqe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NBT05_06695 (radA)
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Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
ChlI
AAA
DUF7125
AAA_24
AAA_22
AAA_5
AAA_16
UCP018868
NTPase_1
NACHT
AAA_14
AAA_18
ABC_tran
Lon_C
nSTAND_NTPase5
MCM
SLFN-g3_helicase
nSTAND3
Isochorismatase
CobU
Motif
Other DBs
NCBI-ProteinID:
UZO82155
LinkDB
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Position
complement(1566744..1568108)
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AA seq
454 aa
AA seq
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MAKVKTVFYCQNCGAQYAKWQGQCTACKEWNTIAEEVVQKPDQKDWKTGSKQHQPKVVLP
LKVSEIDTSKEARYKTYDTELNNVLGGGIVPGSLILLGGEPGIGKSTLLLQISLNLPYRT
LYVSGEESQKQIKMRAERITGKTDNCFILTETKTQNIFKQVEKVDPDIVVIDSIQTLHSD
YVESSPGSISQIRECTSELIKFAKESSIPVLLIGHITKDGAIAGPKILEHMVDTVLQFEG
DRNHVYRILRANKNRFGSTAELGIYEMLGSGLREVSNPSEILISKKEEELSGTAIATTLE
GLRPLLIEIQALVSTAVYGTPQRSATGYNVKRLNMILAVLEKRAGFRLGAKDVFLNITGG
IHIDDTAIDLAVVAAILSSNEDIPIPKDYCFAAEVGLAGEIRPVTRIDQRIQESDKLGFS
TIFISKYSKVSKENYIIKIQKVAKIEDVVAFLFS
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagtaaaaaccgttttttattgtcaaaactgcggagcacaatatgcaaaatgg
caaggtcagtgcaccgcttgtaaagaatggaataccatagcagaagaggtcgttcagaaa
ccggatcaaaaagattggaaaaccgggtcaaaacaacatcaacctaaagtagttcttccg
ctaaaggtttctgagatcgatacgagtaaagaggctcgctataaaacctatgatacggaa
ctgaataatgtgctgggtggaggtattgtacccggatcgttaatattgttaggtggagag
ccaggcattggaaaaagtacattgctcttacaaattagtcttaacctgccctatcgcaca
ttatacgtatccggggaagaaagtcagaagcaaattaaaatgcgtgccgaacgtattacc
ggtaaaacagacaactgctttatcctaacggaaactaagacacaaaatatctttaaacag
gttgaaaaggtagatccggatattgtcgtgattgattcaattcagactttacatagcgat
tatgtagaaagtagcccgggtagcatttctcagattagggaatgtacctcagagctgatt
aaatttgctaaggaatcatcaatcccggtgttactcattggtcatattacaaaagacggt
gctattgccggtcctaaaattctggaacatatggtagatacggtcttacaatttgaagga
gaccgtaaccatgtctatcgtattttaagagcaaataagaacagattcggatcaacggca
gaattaggtatttacgagatgttgggtagcggattaagggaagttagcaatcctagcgaa
atcttaatttcaaaaaaagaagaagaactaagtggtactgcgattgcaacaactttagaa
ggactccgccccttattaattgaaatacaggctttagtgagtaccgccgtatacggcacc
ccacagcgaagtgctaccgggtataacgtcaaaagattaaatatgatcctggcagtgtta
gaaaaaagggcaggttttcgattaggggccaaagatgtttttctaaatattacaggaggc
attcatattgatgataccgccattgaccttgctgtagtagcagctattttatcatcaaat
gaagacattcctattcctaaagactattgttttgcagccgaagtcgggttggctggtgaa
ataagaccagtgacccgtattgatcagcgtatccaggaatctgacaaactaggtttttct
actattttcatttctaagtacagtaaagtaagtaaagaaaactatattattaaaattcaa
aaagtagcaaaaatagaagatgtggttgcttttctatttagttga
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