Aquimarina sp. ERC-38: NBT05_08560
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Entry
NBT05_08560 CDS
T09583
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
aqe
Aquimarina sp. ERC-38
Pathway
aqe00470
D-Amino acid metabolism
aqe00550
Peptidoglycan biosynthesis
aqe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aqe00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NBT05_08560 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NBT05_08560 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
aqe01011
]
NBT05_08560 (murD)
Enzymes [BR:
aqe01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
NBT05_08560 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
aqe01011
]
Precursor biosynthesis
Amino acid ligase
NBT05_08560 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD_N
MurD-like_N
AlaDh_PNT_C
DAO
Pyr_redox_2
3HCDH_N
RE_BanI
FAD_oxidored
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
UZO82514
LinkDB
All DBs
Position
2041314..2042696
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AA seq
460 aa
AA seq
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MSINRSLHTNITPVTSAGKLVVLGAGISGTGAALLAKQKGYNVWVSDASGIAEVEKHKLK
QAGIAWEENGHTLSKILDADVVIKSPGIPDTVALIRKIEEKNIRIIDEIEFASQLTEATL
IAITGSNGKTTTTMLTYHILKNAGFKVKMAGNIGISFAEQVYQEDAEYYVLEISSFQLDR
IQKFAPHIAVITNISPDHLDRYNYEFDKYIASKFNITVNQSGNDYFIFDTDDPNITNHLE
NNKTKAQKIPFSLHKELDKGAYVQDNHITLNIDHNKISMPREALSLKGNHNVKNAMAAAT
VSQLLKIRKTTIRESLESFQGVEHRLEDVLRINNVRYINDSKATNVNAVQYALETMKAPT
IWLVGGVDKGNDYTSLYPLVNEKVKAIICIGIDNQKIIESFKNCMDTILETQSMKEAVRM
AYGLAERNDNVLLSPACSSFDLYNGYEERGRQFKEAIREL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgagtataaataggtcactacatacaaatataacacccgtaacatcagctggaaagctg
gtcgtactgggtgcgggtattagtggcaccggggcagcacttttagcaaaacaaaagggc
tataacgtatgggtttcggatgcttcgggaattgccgaagtcgaaaaacataaattaaag
caagcaggtatagcctgggaagaaaacggacataccttatctaaaattctggatgcggat
gtagtaattaaaagcccgggtattccggatacggtagcacttatccgaaagattgaagaa
aaaaatatccggatcattgatgagattgaatttgcttctcaactgaccgaagctacactg
atagcgataaccggaagtaatggtaaaacaaccactacgatgcttacttatcatattctt
aaaaacgcaggatttaaggtgaaaatggcgggcaatatcggaataagttttgcggaacag
gtatatcaggaagatgcggaatattacgtattagaaatcagtagttttcaactagaccga
attcaaaagtttgcacctcatattgcagtgattacaaatatcagtccggatcatttggat
cggtacaactatgagtttgataaatacatagcttccaaatttaatattacagtgaatcag
tccggaaatgactatttcatttttgatacggatgatcctaatattaccaatcacttagaa
aataataaaacaaaggcgcagaaaattcctttttcacttcataaagaactggataaaggt
gcttatgtgcaagacaatcatataacactaaacatagatcataataaaataagtatgcca
agagaagctttatcattaaaaggaaatcacaatgtaaaaaacgcaatggctgcggctacc
gtttctcaattgttaaaaatcaggaaaacaaccatccgtgagagcctggaaagttttcaa
ggagtagaacaccgtctggaagatgtcttgcgtatcaacaacgtacgatatatcaacgat
agtaaggctaccaatgtaaatgcggtacagtatgcgttagaaactatgaaagcccccacc
atttggcttgtaggtggcgtagataaaggaaatgattatacatcattgtatccgttagta
aatgaaaaagtaaaagcgatcatttgcatcgggattgataatcaaaagattattgaaagt
tttaaaaattgtatggatacgattttagaaactcaatctatgaaagaagccgtacgtatg
gcatatggtttggcagagcgtaatgataacgtattactttcaccagcctgttctagtttt
gacctgtacaatgggtatgaagaaagaggacgacaatttaaagaagctattagggaatta
taa
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