Aquimarina sp. ERC-38: NBT05_08700
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Entry
NBT05_08700 CDS
T09583
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
aqe
Aquimarina sp. ERC-38
Pathway
aqe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aqe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NBT05_08700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aqe03019
]
NBT05_08700
03016 Transfer RNA biogenesis [BR:
aqe03016
]
NBT05_08700
Enzymes [BR:
aqe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NBT05_08700
Messenger RNA biogenesis [BR:
aqe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NBT05_08700
Transfer RNA biogenesis [BR:
aqe03016
]
Prokaryotic type
tRNA degradation factors
NBT05_08700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
PNPase
S1
KH-I_KHDC4-BBP
DeaD_dimer
Motif
Other DBs
NCBI-ProteinID:
UZO82541
LinkDB
All DBs
Position
complement(2081741..2083957)
Genome browser
AA seq
738 aa
AA seq
DB search
MIPKVYREVIDLGDGREISIETGKLAKQAHGSVVVQSGKCMLLCTVVSNYKQSDVDFLPL
TVDYREKFAASGRYPGGFFKREARPSDGEVLTMRLVDRVLRPLFPKDYHAETQVMIQLMS
HDENVMPDAMAGLAASAAIQLSDFPFECAISEARVGRVNGEFIINPTREQLEASDIDMMI
GASADSVMMVEGEMKEISEEEMVEAIKFAHEHIKKQCEAQLKLAEAFGKKEVREYDPERE
DEELEKKIHQMAYDKVYAVAKGGHGKKERGLAFSEIKEEIKETFSEEELEDFGELVSKYY
RKAEKAAVRDLTLKEGLRLDGRKPDEIRPIWCEVDYLPSTHGSAIFTRGETQALATVTLG
TSREANQIDMPSYEGEETFYLHYNFPPFSTGEARPIRGTSRREVGHGNLAQRALKGMIPE
DCPYTVRVVSEVLESNGSSSMATVCSGTMALMDSGVQLKKPVSGIAMGLISDGESGEYAV
LSDILGDEDHLGDMDFKVTGTADGITACQMDIKVKGLSYEILVNALKQAAAGRLHILEKL
IDTIAQPNSDVKAHAPKMVTTKIPGEYIGALIGPGGKVIQELQKETNTTIVINEDPVTEE
GLVEILGTDQNGIDKVLAKIDSITFKPEVGSVYEVKVIKMLDFGAVVEYLDAPGNEVLLH
VSELAWERTENVSDVVKMGDVFDVKYFGIDSRTRKEKVSRKAILPKPEGYTERPPRDRNN
DRNKRGNDRKPRENRRKD
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgattccaaaggtatatcgcgaggttatcgacctcggtgatgggagagaaatttctatt
gaaaccggtaaactggcaaagcaggcacacggatctgtagtggttcagtctggtaagtgt
atgctactttgtacagtagtatctaattacaaacagagcgacgttgattttttaccactt
acagtagattacagggaaaagtttgcagcttcaggaagatatcccggggggttctttaaa
agagaagcccggcctagtgatggagaggtattgaccatgcgattagtagatcgtgtatta
cgtcctttatttcctaaagattatcatgctgaaacacaagtcatgattcaattaatgtct
catgatgaaaatgtaatgccggatgctatggccggattagcagcttctgcagctattcag
ctttcggattttccgtttgaatgtgctatttccgaagcaagggtcggacgggtaaatggt
gagtttatcatcaatcctacccgagagcaattagaagcatccgatattgatatgatgatc
ggagcatccgcagattctgtaatgatggttgagggagaaatgaaagaaattagcgaagaa
gaaatggtggaagccattaaattcgctcatgaacatatcaaaaagcaatgtgaagcacaa
cttaagctagcagaagcttttggtaaaaaagaggttcgagagtacgacccggaacgagaa
gatgaagaattagaaaagaaaatccaccaaatggcttatgacaaagtttatgcggttgcc
aaaggtggacatggaaagaaagaaagaggtttagctttctctgaaattaaagaagaaatt
aaagaaactttttctgaagaagaattagaagattttggagagttggtttccaaatattac
cgcaaagcagaaaaagcagcggttcgcgaccttaccttaaaagaaggacttcgattagac
ggccgtaaaccggatgaaatcaggcctatctggtgtgaagtggattatttaccttctaca
catggttcggcgatttttacccgtggagagacgcaagctttagctactgttaccctgggt
acttcgcgagaagccaaccaaattgatatgccttcttatgaaggagaagaaacattttat
ttgcattataacttcccccctttctctacgggtgaggcacgtccgatccggggtacctcc
agacgagaagtgggacatggtaacctggcgcaacgtgctttaaaaggaatgatccccgag
gattgtccgtatacggttcgtgtagtttctgaagtattagaatctaacggttcttcttct
atggctacggtttgttcaggaacaatggctttgatggattctggggttcagttaaaaaaa
ccggtttctggtattgccatgggactgatttcagacggagaatcaggcgaatacgcagta
ttaagtgatattttgggagatgaagatcacctgggagatatggactttaaagtaaccggt
actgcagacggaattactgcctgtcaaatggatattaaggtcaaaggcttatcgtatgaa
atcctggtaaatgccttaaaacaagcagccgcaggaagattacatattttagagaaatta
atagataccattgctcaacctaattcggatgtaaaagcacatgctcctaaaatggtaacg
actaagatccctggagagtatatcggtgcattgatcggaccgggtggaaaagttatacaa
gaacttcaaaaagaaacaaatacgactattgtaattaacgaagatccggtaaccgaagaa
ggattagtagaaattctgggaactgatcagaacggtattgataaagtattagcaaaaatc
gattctatcacatttaaaccagaagtaggaagcgtatatgaagtaaaggttattaaaatg
cttgactttggtgcagtggtagaatacctggatgctccgggtaatgaagtattgctacat
gtatctgaactcgcttgggaacgcactgagaatgtaagtgatgtagtaaaaatgggtgat
gtttttgatgtcaaatattttggtattgattccagaacccgtaaagagaaggtttctcgt
aaagctattctacctaagccggaaggttatacagaacgacctcccagagaccggaataat
gatcgtaataaaagaggaaacgaccgtaagcctcgtgaaaatagaagaaaggactag
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