KEGG   Aquimarina sp. ERC-38: NBT05_10085
Entry
NBT05_10085       CDS       T09583                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
aqe  Aquimarina sp. ERC-38
Pathway
aqe03030  DNA replication
aqe03430  Mismatch repair
aqe03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:aqe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NBT05_10085
   03430 Mismatch repair
    NBT05_10085
   03440 Homologous recombination
    NBT05_10085
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aqe03032]
    NBT05_10085
   03400 DNA repair and recombination proteins [BR:aqe03400]
    NBT05_10085
Enzymes [BR:aqe01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     NBT05_10085
DNA replication proteins [BR:aqe03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     NBT05_10085
DNA repair and recombination proteins [BR:aqe03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     NBT05_10085
SSDB
Motif
Pfam: RNase_T ExoX-like_C RNase_H_2
Other DBs
NCBI-ProteinID: UZO79319
LinkDB
Position
2441498..2442277
AA seq 259 aa
MELKLKRPICFFDLETTGVNISKDRIVEISILKVFPNGTQESKTWLVNPEMPIPAETTAI
HGITNEKVANEPVFKEIAPKVNEMIKGSDLGGFNSNRFDIPLLAEELLRVGLDFDMKNTV
AVDVQTIFHKMEQRTLAAAYKFYCDKDLTDAHTAEADTMATYEVLKAQLDRYPELKNDTK
FLADFSARKQFVDFAGFIAYNKEKKEIFSFGKHKGKLVETVLDEEPGYFGWLQNADFPLY
TKKVLTAIRLRKLNNSLNL
NT seq 780 nt   +upstreamnt  +downstreamnt
atggagcttaaattaaaaaggcctatttgtttctttgatctggaaacaaccggggttaat
atttctaaagatcgcattgttgaaatctctattttaaaagtttttcctaatggaactcag
gaaagcaaaacctggctggtcaatcctgaaatgcctatacctgctgaaactacagctatt
catggtattactaatgaaaaagtagcaaacgaacctgtatttaaagaaattgctccaaag
gttaatgagatgatcaaaggtagtgacttgggggggtttaactctaatcgctttgatatt
cctttgttagccgaagaattgctaagggtaggactggattttgatatgaaaaatacagta
gcagttgatgtgcaaaccatttttcataaaatggagcagcgaaccttagctgcagcttat
aaattctattgtgacaaagatctgacggatgctcacacggctgaggctgatactatggct
acctatgaagttttaaaagcacaactggaccgctacccggaactgaaaaatgatactaaa
ttcttagcagatttcagcgcgcgcaagcagtttgtggattttgccggatttattgcttat
aataaagaaaaaaaggagattttttcgtttggtaagcataaaggtaaactggtagagacc
gttctggatgaagaaccgggttatttcgggtggttgcaaaatgccgattttccgttatat
accaaaaaagtcctgaccgccatacgactgcgaaaattgaataatagcttgaacttataa

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