Aquimarina sp. ERC-38: NBT05_14205
Help
Entry
NBT05_14205 CDS
T09583
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
aqe
Aquimarina sp. ERC-38
Brite
KEGG Orthology (KO) [BR:
aqe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aqe03400
]
NBT05_14205
Enzymes [BR:
aqe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
NBT05_14205
DNA repair and recombination proteins [BR:
aqe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
NBT05_14205
Prokaryotic type
NBT05_14205
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UZO80095
LinkDB
All DBs
Position
complement(3400259..3401794)
Genome browser
AA seq
511 aa
AA seq
DB search
MKTAVYWIKRDFRIFDNIALTHALEAFDQVIPIYIIEPSFLEAPDTSLLHTYAITTALTD
LVTNYKKRDGEIIIYKGEVVDIFKEVHKHVPFNAIYAHEEIGTNRTYKRDIAVREWSDSI
GTSFKEFAQTAVFRNFYDRDKRHTLWKEFTNEELLPIPSTLHKCKVPSEIKKFSCTDYQK
ELDAPKSTTLRDTLDYDQIQKVSESNAEKDLTSFLYERGIAYRGGISSPLTAFTAGSRTS
VHMAWGTMTGRTIYQRTQNRMDELLELKEKGDPDAGKWRMSLRSFMSRLHWRDHFIQRLE
TDPQMEFQALNVAYEDLFYENDPAHYQAWITGTTGFPMIDACIRCLYQTGFLNFRMRALL
TSFACHTLHISWKLINYPMAQLYTDYEPGIHISQLQMQASVVGINTVRIYSPTKQIIDQD
PEAVFIKKFVPELRPFSAEEIIAHTDTPLGDYPAQIVDWKTASTEMRTRIYAVRKQEGYR
EIAAKVYEKHGSRRSSGKKARPKKTKAKAST
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacggcagtatactggataaaaagagattttagaatttttgataatatagcctta
acccatgctttagaagcctttgatcaggttattcctatttatattattgaaccctctttc
ttagaggctcccgacacttccctattacatacctatgccattactacagcattaacggat
ttagtaaccaattacaaaaaaagggacggagaaattattatttataagggggaggtagtt
gatatattcaaagaagtacataaacacgtaccttttaatgctatctatgctcatgaagag
attggaacaaaccgaacatataaaagagatatagccgttcgggagtggtctgatagtatc
ggtacatcttttaaggaatttgcgcaaactgcggtatttcgtaatttttatgatcgggat
aaacgccatacactttggaaagaatttaccaacgaagaattactgcccataccttcaacc
cttcataagtgtaaggttccttccgaaattaaaaagtttagttgtacggattatcaaaaa
gaattggatgcgcctaaatcaactacgttaagagatacgcttgattatgatcagatacaa
aaagtaagcgaatccaatgctgaaaaggatttaactagttttttatatgaacggggaatt
gcttatcggggcggaatctcatcgccacttactgcgtttaccgccgggtctcgtacttcg
gtacatatggcgtggggaacgatgacgggcagaacgatctatcaacgaactcaaaatcgt
atggacgaactcctggagctaaaagaaaaaggggatcctgatgcaggcaaatggcgaatg
tcgctgcgttcttttatgtcccgtttacactggcgggatcattttatccaacgcttagaa
acggatccgcaaatggaattccaggcattgaatgttgcctatgaagatttgttttatgaa
aatgatccggcacattatcaggcttggattacgggtaccacgggattccctatgattgat
gcttgtatccgatgtttataccagaccgggtttttaaatttcaggatgcgggctttactt
acctcctttgcctgtcatacgctacatatcagttggaagttaattaattatccgatggca
caattatatacggattatgaaccaggtattcatattagccaattacaaatgcaggcaagt
gtagtaggaattaatacggtacggatttatagcccaaccaagcagatcattgatcaggac
ccggaagcagtttttataaaaaagttcgttccggaattacggcctttttctgccgaagaa
atcattgcccatacggacactccattaggagattatccggcacaaatcgtagattggaaa
acggcttctaccgaaatgcgaactcgtatctatgccgtacgtaaacaagaaggatatcgt
gagatagcagctaaagtgtatgaaaaacacgggtcacgacgaagttccgggaaaaaggcg
agacctaaaaagactaaagctaaagcttccacataa
DBGET
integrated database retrieval system
