Aquimarina sp. ERC-38: NBT05_14610
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Entry
NBT05_14610 CDS
T09583
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
aqe
Aquimarina sp. ERC-38
Brite
KEGG Orthology (KO) [BR:
aqe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aqe03400
]
NBT05_14610
Enzymes [BR:
aqe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
NBT05_14610
DNA repair and recombination proteins [BR:
aqe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
NBT05_14610
Prokaryotic type
NBT05_14610
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
BsNagA_N
Motif
Other DBs
NCBI-ProteinID:
UZO80174
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Position
3495017..3496327
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AA seq
436 aa
AA seq
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MGKNKVSIFWFRRDLRLEDNIGFFHALKEGNPVIPIFIFDKNILDKLPEDDARITFIFET
LQTMRSELQKKYKSSLALYYGTPESVFKELIKEFDITTVYTNRDYEPYAKERDQNITDIL
QEKRIDFKTFKDQVIFEKDEVVKADGKPYVVYTPYKNKWKEQFSIDKLKIYDTNSYFDNL
VKRTDLPNLSLEDMNFTASSLKVPDYEVNSELLENYEKTRNYPSKDHGTSRIGPHLRFGT
VSIRKIVKQAYDVNNETFWSELIWREFFMQILWHFPETTDQAFKSKYDRIEWRNDEQEFQ
KWKNGETGYPLVDAGMRQLNAIGYMHNRVRMLTASFLCKHLLIDWRWGEAYFAEKLLDYE
QSSNVGNWQWASGSGVDASPYFRIFNPTTQIIKFDKDHKYINEWVGNLQEIKYPEPMVDH
KEARERCLQVYKEAVA
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaaataaagtttctattttttggttccgtagagatttacgtttagaggacaat
attggttttttccacgctttaaaagaaggtaatccggttatccctatatttatatttgat
aaaaatattttagataaattacctgaagatgacgcccggattacttttatctttgaaacc
ttacagacgatgaggtctgagttacagaaaaagtataaaagctcattggcactctattac
ggtactcccgaatctgtatttaaagagttaattaaagagtttgatattactaccgtatat
accaatcgcgattacgaaccgtatgcaaaggagcgtgatcaaaacattacggatatacta
caagaaaaaaggattgactttaaaacttttaaagatcaggtaatttttgaaaaagatgaa
gtagttaaagccgacggaaagccttatgtagtctacactccttataaaaataaatggaaa
gaacagtttagcatcgataagttgaagatatatgataccaattcatatttcgataatttg
gtaaaacgtactgatttacctaatctatctttagaagatatgaattttacagcatcttca
ctaaaagttccggactatgaagtaaattccgaattattagaaaactacgaaaaaacacga
aattatccgtcaaaagatcatggaacttcaagaataggacctcatttaagattcggaacc
gtaagcattcgtaaaatcgtcaagcaagcttatgatgttaataatgaaacgttttggtct
gaattaatttggcgagaattttttatgcaaattttatggcactttccggaaactacagac
caagcctttaaatctaagtacgatcgcattgagtggcgaaatgatgaacaggaatttcaa
aaatggaaaaacggagaaaccggttatccgctagttgacgccgggatgcgtcaattaaac
gccataggatatatgcataatagagtacggatgttaaccgccagttttttatgtaaacac
ctattaattgactggcgctggggtgaagcatattttgcggaaaagttattagattatgaa
caatcatcaaatgtagggaactggcagtgggcctcaggatcgggagtggatgcttcaccg
tatttccgcatatttaatccgactactcaaattataaaatttgataaagaccataaatat
attaacgaatgggtgggtaatttacaggaaataaagtatcctgaacccatggttgaccat
aaagaagctagagaacgctgtttacaggtatataaagaagccgttgcctaa
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